Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.31□□□□□ -1.56
SLC44A1Q8WWI5 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC44A1Q8WWI5 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.31□□□□□ -1.56
SLC44A1Q8WWI5 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC44A1Q8WWI5 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.31□□□□□ -1.56
SLC44A1Q8WWI5 AL133247.2-201ENST00000603236 482 ntBASIC5.31□□□□□ -1.56
SLC44A1Q8WWI5 AC009597.2-201ENST00000604659 592 ntBASIC5.31□□□□□ -1.56
SLC44A1Q8WWI5 OR8G7P-201ENST00000616658 848 ntBASIC5.31□□□□□ -1.56
SLC44A1Q8WWI5 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.31□□□□□ -1.56
SLC44A1Q8WWI5 AC011503.2-201ENST00000594230 1500 ntBASIC5.31□□□□□ -1.56
SLC44A1Q8WWI5 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
SLC44A1Q8WWI5 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SLC44A1Q8WWI5 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SLC44A1Q8WWI5 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SLC44A1Q8WWI5 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 AC104260.2-201ENST00000623551 3497 ntBASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 AL731532.2-201ENST00000623542 1953 ntBASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 AC017079.1-201ENST00000333650 415 ntBASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 RN7SKP292-201ENST00000365522 317 ntBASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 SNORA17A-201ENST00000391185 133 ntBASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 AL512422.1-201ENST00000407033 553 ntBASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 AC007738.1-201ENST00000413892 348 ntBASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 AL596448.1-201ENST00000415024 392 ntBASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 PRUNEP1-201ENST00000425846 705 ntBASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 FMO7P-201ENST00000436045 768 ntBASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 SCAND3P1-201ENST00000439854 1060 ntBASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 AL161636.2-201ENST00000445179 927 ntBASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 AC105399.1-202ENST00000447303 205 ntBASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 AL445665.1-202ENST00000452436 324 ntBASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 AC108161.1-201ENST00000461060 402 ntBASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 AC090543.1-201ENST00000492168 485 ntBASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 AC027338.1-201ENST00000514840 825 ntBASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 TMEM97P2-201ENST00000517841 403 ntBASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 RN7SL708P-201ENST00000580952 299 ntBASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 AC024933.1-201ENST00000608472 348 ntBASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 BX005214.3-202ENST00000619809 325 ntBASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 AP000648.2-201ENST00000624182 404 ntBASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 SNORA17.5-201ENST00000630429 132 ntBASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.3□□□□□ -1.56
SLC44A1Q8WWI5 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 SOCS5P3-201ENST00000425115 1576 ntBASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 OR13C1P-202ENST00000641378 2919 ntBASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 RNA5SP223-201ENST00000365174 120 ntBASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 RNA5SP296-201ENST00000410523 111 ntBASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 RN7SKP206-201ENST00000410823 293 ntBASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 HSPE1P16-201ENST00000426640 348 ntBASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 RNU6-889P-201ENST00000517189 103 ntBASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 AC027544.3-201ENST00000535082 757 ntBASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 YWHABP2-201ENST00000540201 713 ntBASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC44A1Q8WWI5 AC008147.3-201ENST00000548666 354 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms