Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 TCP11X3P-202ENST00000514289 1254 ntBASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 NPM1P52-201ENST00000518264 846 ntBASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 DEFB108A-201ENST00000530110 222 ntBASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 AP000619.3-201ENST00000535634 1127 ntBASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 RN7SL208P-201ENST00000577964 296 ntBASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 AL049840.6-201ENST00000604583 345 ntBASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 AL392112.1-201ENST00000605115 829 ntBASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 AC092354.1-201ENST00000606057 376 ntBASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 AL589743.7-201ENST00000612637 233 ntBASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 AC011472.4-201ENST00000615848 491 ntBASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 AC009159.1-201ENST00000618386 642 ntBASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 AL354718.1-201ENST00000619764 589 ntBASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 AC087565.3-203ENST00000641018 837 ntBASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 AC131971.1-201ENST00000332881 1482 ntBASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.84□□□□□ -1.32
SHKBP1Q8TBC3 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
SHKBP1Q8TBC3 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC6.84□□□□□ -1.32
SHKBP1Q8TBC3 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.84□□□□□ -1.32
SHKBP1Q8TBC3 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.84□□□□□ -1.32
SHKBP1Q8TBC3 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
SHKBP1Q8TBC3 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.32
SHKBP1Q8TBC3 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.84□□□□□ -1.32
SHKBP1Q8TBC3 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
SHKBP1Q8TBC3 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 RNU6-500P-201ENST00000362349 107 ntBASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 Y_RNA.509-201ENST00000384506 99 ntBASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 MIR181A1-201ENST00000385026 110 ntBASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 AC017035.1-201ENST00000411999 1115 ntBASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 OR8F1P-201ENST00000425243 930 ntBASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 AC009784.1-201ENST00000426484 460 ntBASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 Z83838.1-202ENST00000456225 839 ntBASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 HSPE1P23-201ENST00000509838 286 ntBASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 ZNF519P4-201ENST00000514008 125 ntBASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 CYCSP25-201ENST00000525280 316 ntBASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 OR5AK3P-201ENST00000527486 1297 ntBASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 OR11J2P-201ENST00000555298 907 ntBASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 AC015818.6-201ENST00000584274 634 ntBASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 GLYATL1P2-202ENST00000588046 902 ntBASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 BNIP3P9-201ENST00000603714 553 ntBASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 UBE2Q2P2-203ENST00000613592 761 ntBASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 AL607023.1-201ENST00000620045 248 ntBASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 AC131009.3-201ENST00000621809 287 ntBASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 AC004836.1-201ENST00000623032 634 ntBASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 FRG1KP-201ENST00000623592 341 ntBASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 AC120057.5-201ENST00000623840 154 ntBASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 AC135068.5-201ENST00000624197 983 ntBASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms