Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 NPM1P21-201ENST00000513394 762 ntBASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 RN7SKP287-201ENST00000516546 266 ntBASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 C1GALT1P3-201ENST00000522049 819 ntBASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 AL138960.1-201ENST00000613838 513 ntBASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 AC003985.2-201ENST00000562268 1669 ntBASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 OR9K1P-202ENST00000641111 3217 ntBASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 PARP4P1-201ENST00000435945 2337 ntBASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 HSPD1P7-201ENST00000447985 1686 ntBASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 RNU1-43P-201ENST00000365052 165 ntBASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 OR13C3-201ENST00000374781 1108 ntBASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 SNORA51.8-201ENST00000384234 132 ntBASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 RPL26P37-201ENST00000411983 438 ntBASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 AC012519.1-201ENST00000424588 610 ntBASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 FO393414.1-201ENST00000428697 1184 ntBASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 FAM96AP1-201ENST00000430879 482 ntBASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 AK3P5-201ENST00000432033 519 ntBASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 AL035246.1-201ENST00000433554 1255 ntBASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 RPL31P44-201ENST00000447680 377 ntBASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 AC008897.1-201ENST00000494006 347 ntBASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 RNU6-276P-201ENST00000516114 96 ntBASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 LRRC34P1-201ENST00000542742 915 ntBASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 AC093524.1-201ENST00000564266 1094 ntBASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 OOSP1P2-201ENST00000579644 351 ntBASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 BNIP3P22-201ENST00000593399 556 ntBASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 MTCO2P22-201ENST00000603246 681 ntBASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 AC093424.1-201ENST00000604999 338 ntBASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SMC1BQ8NDV3 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 AP000432.2-201ENST00000624164 2048 ntBASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 AP002370.1-201ENST00000528055 1602 ntBASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 RNU5B-4P-201ENST00000363508 111 ntBASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 RNU6-481P-201ENST00000384194 107 ntBASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 RNU6-796P-201ENST00000391086 107 ntBASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 DUTP5-201ENST00000406790 469 ntBASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 RNU2-17P-201ENST00000410290 190 ntBASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 OR5M12P-201ENST00000423388 929 ntBASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 RPS27AP6-201ENST00000427962 448 ntBASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 AC023141.8-201ENST00000442554 208 ntBASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 MTCYBP11-201ENST00000447254 1109 ntBASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 MTND6P5-201ENST00000448266 512 ntBASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 AL031313.1-201ENST00000448435 256 ntBASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms