Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC65Q8IXS2 AL353625.1-202ENST00000366273 571 ntBASIC5.65□□□□□ -1.5
CCDC65Q8IXS2 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CCDC65Q8IXS2 BMS1P3-201ENST00000372011 932 ntBASIC5.65□□□□□ -1.5
CCDC65Q8IXS2 TRAV35-201ENST00000390462 330 ntBASIC5.65□□□□□ -1.5
CCDC65Q8IXS2 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.65□□□□□ -1.5
CCDC65Q8IXS2 RN7SKP16-201ENST00000410180 299 ntBASIC5.65□□□□□ -1.5
CCDC65Q8IXS2 AC211486.3-201ENST00000412694 621 ntBASIC5.65□□□□□ -1.5
CCDC65Q8IXS2 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC65Q8IXS2 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.65□□□□□ -1.5
CCDC65Q8IXS2 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC65Q8IXS2 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC65Q8IXS2 RN7SL515P-201ENST00000463999 297 ntBASIC5.65□□□□□ -1.5
CCDC65Q8IXS2 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC65Q8IXS2 RPL7AP10-201ENST00000481016 791 ntBASIC5.65□□□□□ -1.5
CCDC65Q8IXS2 AC079841.1-201ENST00000481228 950 ntBASIC5.65□□□□□ -1.5
CCDC65Q8IXS2 OR9N1P-201ENST00000491296 333 ntBASIC5.65□□□□□ -1.5
CCDC65Q8IXS2 KATNBL1P4-201ENST00000503545 918 ntBASIC5.65□□□□□ -1.5
CCDC65Q8IXS2 USP9YP2-201ENST00000504503 1000 ntBASIC5.65□□□□□ -1.5
CCDC65Q8IXS2 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC65Q8IXS2 USP9YP1-201ENST00000513521 1002 ntBASIC5.65□□□□□ -1.5
CCDC65Q8IXS2 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC65Q8IXS2 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC65Q8IXS2 AC007066.2-202ENST00000566531 914 ntBASIC5.65□□□□□ -1.5
CCDC65Q8IXS2 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC65Q8IXS2 SUMO2P15-201ENST00000604285 278 ntBASIC5.65□□□□□ -1.5
CCDC65Q8IXS2 MIR6862-1-201ENST00000613016 70 ntBASIC5.65□□□□□ -1.5
CCDC65Q8IXS2 MIR6862-2-201ENST00000614755 70 ntBASIC5.65□□□□□ -1.5
CCDC65Q8IXS2 MIR6729-201ENST00000618194 65 ntBASIC5.65□□□□□ -1.5
CCDC65Q8IXS2 AF117829.2-201ENST00000619538 361 ntBASIC5.65□□□□□ -1.5
CCDC65Q8IXS2 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC65Q8IXS2 AP000648.2-201ENST00000624182 404 ntBASIC5.65□□□□□ -1.5
CCDC65Q8IXS2 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC65Q8IXS2 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.65□□□□□ -1.5
CCDC65Q8IXS2 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC65Q8IXS2 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC65Q8IXS2 SMG1P4-204ENST00000523028 4131 ntBASIC5.65□□□□□ -1.51
CCDC65Q8IXS2 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.65□□□□□ -1.51
CCDC65Q8IXS2 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
CCDC65Q8IXS2 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC65Q8IXS2 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC65Q8IXS2 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC65Q8IXS2 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC65Q8IXS2 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC65Q8IXS2 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC65Q8IXS2 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC65Q8IXS2 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC65Q8IXS2 AC017079.1-201ENST00000333650 415 ntBASIC5.64□□□□□ -1.51
CCDC65Q8IXS2 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
CCDC65Q8IXS2 RN7SKP97-201ENST00000410966 333 ntBASIC5.64□□□□□ -1.51
CCDC65Q8IXS2 AC007738.1-201ENST00000413892 348 ntBASIC5.64□□□□□ -1.51
CCDC65Q8IXS2 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.64□□□□□ -1.51
CCDC65Q8IXS2 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC65Q8IXS2 TCEA1P3-201ENST00000443005 880 ntBASIC5.64□□□□□ -1.51
CCDC65Q8IXS2 SERPINA7P1-201ENST00000443077 631 ntBASIC5.64□□□□□ -1.51
CCDC65Q8IXS2 SNRPCP2-201ENST00000504370 475 ntBASIC5.64□□□□□ -1.51
CCDC65Q8IXS2 HIGD1AP14-201ENST00000507617 282 ntBASIC5.64□□□□□ -1.51
CCDC65Q8IXS2 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC65Q8IXS2 RN7SKP260-201ENST00000516907 149 ntBASIC5.64□□□□□ -1.51
CCDC65Q8IXS2 AC021733.2-201ENST00000518830 497 ntBASIC5.64□□□□□ -1.51
CCDC65Q8IXS2 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CCDC65Q8IXS2 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC65Q8IXS2 MIR1269B-201ENST00000580405 75 ntBASIC5.64□□□□□ -1.51
CCDC65Q8IXS2 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC65Q8IXS2 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC65Q8IXS2 AP001005.3-201ENST00000622049 129 ntBASIC5.64□□□□□ -1.51
CCDC65Q8IXS2 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC65Q8IXS2 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
CCDC65Q8IXS2 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC65Q8IXS2 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC65Q8IXS2 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC65Q8IXS2 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CCDC65Q8IXS2 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CCDC65Q8IXS2 NEAT1-202ENST00000501122 22743 ntBASIC5.64□□□□□ -1.51
CCDC65Q8IXS2 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC65Q8IXS2 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC65Q8IXS2 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC65Q8IXS2 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.63□□□□□ -1.51
CCDC65Q8IXS2 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CCDC65Q8IXS2 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.63□□□□□ -1.51
CCDC65Q8IXS2 SNORA51.1-201ENST00000363243 140 ntBASIC5.63□□□□□ -1.51
CCDC65Q8IXS2 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC65Q8IXS2 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC65Q8IXS2 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.63□□□□□ -1.51
CCDC65Q8IXS2 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC65Q8IXS2 DDX39BP1-205ENST00000422507 192 ntBASIC5.63□□□□□ -1.51
CCDC65Q8IXS2 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC65Q8IXS2 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC65Q8IXS2 RPSAP41-201ENST00000439695 860 ntBASIC5.63□□□□□ -1.51
CCDC65Q8IXS2 CNOT7P2-201ENST00000441051 832 ntBASIC5.63□□□□□ -1.51
CCDC65Q8IXS2 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC65Q8IXS2 AC097484.1-201ENST00000471148 389 ntBASIC5.63□□□□□ -1.51
CCDC65Q8IXS2 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC65Q8IXS2 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC65Q8IXS2 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC65Q8IXS2 AL512310.9-201ENST00000553311 948 ntBASIC5.63□□□□□ -1.51
CCDC65Q8IXS2 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CCDC65Q8IXS2 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC65Q8IXS2 BX005214.3-202ENST00000619809 325 ntBASIC5.63□□□□□ -1.51
CCDC65Q8IXS2 AC010809.3-201ENST00000621310 641 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms