Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 BX323845.1-201ENST00000432417 179 ntBASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 AL354714.3-201ENST00000447284 493 ntBASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 BTF3P6-201ENST00000448054 499 ntBASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 GYG1P1-201ENST00000460864 698 ntBASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 RPL7AP10-201ENST00000481016 791 ntBASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 RPS21P4-201ENST00000487122 248 ntBASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 OR9N1P-201ENST00000491296 333 ntBASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 AC069304.1-201ENST00000491593 704 ntBASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 AC024558.1-201ENST00000505008 528 ntBASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 RN7SKP260-201ENST00000516907 149 ntBASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 RPL23AP53-201ENST00000521854 457 ntBASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 AL512329.2-201ENST00000607350 548 ntBASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 SNORA73.1-201ENST00000363107 205 ntBASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 LRRC37BP1-201ENST00000398851 714 ntBASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 VDAC2P1-201ENST00000399358 958 ntBASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 OR5M12P-201ENST00000423388 929 ntBASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 CHEK2P5-201ENST00000423877 246 ntBASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 OR52B5P-201ENST00000435337 951 ntBASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 AL589765.3-201ENST00000446084 462 ntBASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 AL157385.1-201ENST00000446973 268 ntBASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 PPIAP20-201ENST00000449839 135 ntBASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 AL691482.1-201ENST00000453255 87 ntBASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 AC010350.1-201ENST00000504908 231 ntBASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 AP002373.2-201ENST00000541631 1060 ntBASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 BNIP3P1-201ENST00000547295 580 ntBASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 AC012146.2-201ENST00000576545 416 ntBASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 AC011445.2-201ENST00000599274 173 ntBASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 AC126915.2-201ENST00000610957 190 ntBASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 MIR6729-201ENST00000618194 65 ntBASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 AC099494.2-201ENST00000623371 978 ntBASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 OR52B5P-202ENST00000641118 1110 ntBASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 AC068446.1-201ENST00000556425 1549 ntBASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDKL3Q8IVW4 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.16□□□□□ -1.58
CDKL3Q8IVW4 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDKL3Q8IVW4 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.16□□□□□ -1.58
CDKL3Q8IVW4 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDKL3Q8IVW4 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.16□□□□□ -1.58
CDKL3Q8IVW4 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDKL3Q8IVW4 AC013442.1-201ENST00000397347 228 ntBASIC5.16□□□□□ -1.58
CDKL3Q8IVW4 AL512422.1-201ENST00000407033 553 ntBASIC5.16□□□□□ -1.58
CDKL3Q8IVW4 DDX39BP1-205ENST00000422507 192 ntBASIC5.16□□□□□ -1.58
CDKL3Q8IVW4 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.16□□□□□ -1.58
CDKL3Q8IVW4 AL450023.3-201ENST00000440592 271 ntBASIC5.16□□□□□ -1.58
CDKL3Q8IVW4 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.16□□□□□ -1.58
CDKL3Q8IVW4 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms