Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 AC235565.1-201ENST00000456962 1325 ntBASIC5.2□□□□□ -1.58
LDLRAP1Q5SW96 MUC2-202ENST00000613187 4845 ntBASIC5.2□□□□□ -1.58
LDLRAP1Q5SW96 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.2□□□□□ -1.58
LDLRAP1Q5SW96 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 AL590763.1-201ENST00000398297 1545 ntBASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 SNORA17.1-201ENST00000362945 126 ntBASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 U3.2-201ENST00000362981 210 ntBASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 U3.3-201ENST00000362986 216 ntBASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 RNU6-670P-201ENST00000364312 104 ntBASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 RNU1-43P-201ENST00000365052 165 ntBASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 RNU6-1263P-201ENST00000384601 106 ntBASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 MIR589-201ENST00000385238 99 ntBASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 NUDT19P3-201ENST00000404698 555 ntBASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 AC211486.3-201ENST00000412694 621 ntBASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 GAPDHP58-201ENST00000438477 1006 ntBASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 RPS29P10-201ENST00000439197 166 ntBASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 AC245047.2-201ENST00000441060 530 ntBASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 AL163193.1-201ENST00000444895 788 ntBASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 FAR2P1-206ENST00000449736 709 ntBASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 RPS4XP12-201ENST00000461747 709 ntBASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 AC072052.1-201ENST00000496556 306 ntBASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 HIGD1AP14-201ENST00000507617 282 ntBASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 AL358913.1-201ENST00000554342 121 ntBASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 AC127381.1-201ENST00000555979 939 ntBASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 AC008814.1-201ENST00000603797 406 ntBASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 AL512624.1-201ENST00000613638 469 ntBASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 AL590410.1-201ENST00000617925 333 ntBASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 MIR6839-201ENST00000620425 113 ntBASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
LDLRAP1Q5SW96 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
LDLRAP1Q5SW96 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
LDLRAP1Q5SW96 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LDLRAP1Q5SW96 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
LDLRAP1Q5SW96 AL356317.1-201ENST00000396110 1436 ntBASIC5.18□□□□□ -1.58
LDLRAP1Q5SW96 RARSP1-201ENST00000542842 1418 ntBASIC5.18□□□□□ -1.58
LDLRAP1Q5SW96 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LDLRAP1Q5SW96 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LDLRAP1Q5SW96 RNA5SP90-201ENST00000364801 99 ntBASIC5.18□□□□□ -1.58
LDLRAP1Q5SW96 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.18□□□□□ -1.58
LDLRAP1Q5SW96 RNU1-74P-201ENST00000384108 171 ntBASIC5.18□□□□□ -1.58
LDLRAP1Q5SW96 MIR600-201ENST00000385007 98 ntBASIC5.18□□□□□ -1.58
LDLRAP1Q5SW96 DUTP5-201ENST00000406790 469 ntBASIC5.18□□□□□ -1.58
LDLRAP1Q5SW96 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LDLRAP1Q5SW96 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.18□□□□□ -1.58
LDLRAP1Q5SW96 CNOT7P2-201ENST00000441051 832 ntBASIC5.18□□□□□ -1.58
LDLRAP1Q5SW96 NOP56P2-201ENST00000447491 769 ntBASIC5.18□□□□□ -1.58
LDLRAP1Q5SW96 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.18□□□□□ -1.58
LDLRAP1Q5SW96 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.18□□□□□ -1.58
LDLRAP1Q5SW96 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.18□□□□□ -1.58
LDLRAP1Q5SW96 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.18□□□□□ -1.58
LDLRAP1Q5SW96 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.18□□□□□ -1.58
LDLRAP1Q5SW96 RN7SL814P-201ENST00000487715 300 ntBASIC5.18□□□□□ -1.58
LDLRAP1Q5SW96 RPL15P21-201ENST00000495592 567 ntBASIC5.18□□□□□ -1.58
LDLRAP1Q5SW96 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.18□□□□□ -1.58
LDLRAP1Q5SW96 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.18□□□□□ -1.58
LDLRAP1Q5SW96 RNU6-319P-201ENST00000516025 108 ntBASIC5.18□□□□□ -1.58
LDLRAP1Q5SW96 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.18□□□□□ -1.58
LDLRAP1Q5SW96 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LDLRAP1Q5SW96 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.18□□□□□ -1.58
LDLRAP1Q5SW96 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC5.18□□□□□ -1.58
LDLRAP1Q5SW96 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.18□□□□□ -1.58
LDLRAP1Q5SW96 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
LDLRAP1Q5SW96 AC011626.1-201ENST00000604710 562 ntBASIC5.18□□□□□ -1.58
LDLRAP1Q5SW96 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LDLRAP1Q5SW96 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.18□□□□□ -1.58
LDLRAP1Q5SW96 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
LDLRAP1Q5SW96 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms