Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 OR5W1P-201ENST00000423705 938 ntBASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 CHEK2P5-201ENST00000423877 246 ntBASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 AC093716.1-201ENST00000435923 377 ntBASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 AL445665.1-202ENST00000452436 324 ntBASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 RPS20P4-201ENST00000461659 355 ntBASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 AC107398.1-201ENST00000486904 505 ntBASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 BTG4P1-201ENST00000510421 183 ntBASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 RNU6-1028P-201ENST00000517164 93 ntBASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 MTATP6P15-201ENST00000527233 835 ntBASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 OR7E128P-201ENST00000532736 1024 ntBASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 SNORD39.2-201ENST00000579995 76 ntBASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 AP002906.1-201ENST00000603405 233 ntBASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 AL355493.4-201ENST00000618530 292 ntBASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 AL158062.1-201ENST00000619632 745 ntBASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 AC117409.1-201ENST00000470499 1310 ntBASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
PTCHD3Q3KNS1 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 SNORA51.1-201ENST00000363243 140 ntBASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 RNA5SP242-201ENST00000364171 118 ntBASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 RNA5SP500-201ENST00000364486 119 ntBASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 RNU6-906P-201ENST00000384700 70 ntBASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 RNU6-932P-201ENST00000391108 106 ntBASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 RPL11P3-201ENST00000395256 523 ntBASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 ATP5HP3-201ENST00000396994 486 ntBASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 MTCO2P31-201ENST00000402702 684 ntBASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 AC107081.1-201ENST00000414975 361 ntBASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 METTL15P3-201ENST00000415522 1221 ntBASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 RPL5P2-201ENST00000429598 854 ntBASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 AC092155.2-201ENST00000454675 477 ntBASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 AC093166.2-201ENST00000455969 1017 ntBASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 GTF2IP12-201ENST00000456547 356 ntBASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 SNRPCP3-201ENST00000474888 476 ntBASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 AC098583.1-201ENST00000480875 255 ntBASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 AC134050.1-201ENST00000495088 933 ntBASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 IGLV3-30-201ENST00000524362 298 ntBASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 AC079064.1-201ENST00000528365 362 ntBASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 AP000648.1-201ENST00000529682 397 ntBASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 MRPS36P5-201ENST00000551909 298 ntBASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 AC113368.1-201ENST00000603736 382 ntBASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 AL031601.1-201ENST00000605702 394 ntBASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 RN7SL787P-201ENST00000613000 284 ntBASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 AC011330.2-201ENST00000621680 635 ntBASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 AC120349.3-201ENST00000624377 529 ntBASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTCHD3Q3KNS1 AL158152.1-201ENST00000602652 1435 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms