Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
USF2Q15853 AC009229.4-201ENST00000623854 1947 ntBASIC4.32□□□□□ -1.72
USF2Q15853 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.32□□□□□ -1.72
USF2Q15853 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
USF2Q15853 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
USF2Q15853 AC100778.3-201ENST00000580060 1750 ntBASIC4.32□□□□□ -1.72
USF2Q15853 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
USF2Q15853 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.32□□□□□ -1.72
USF2Q15853 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
USF2Q15853 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
USF2Q15853 MT-RNR2-201ENST00000387347 1559 ntBASIC4.31□□□□□ -1.72
USF2Q15853 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
USF2Q15853 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
USF2Q15853 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.31□□□□□ -1.72
USF2Q15853 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.31□□□□□ -1.72
USF2Q15853 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC4.31□□□□□ -1.72
USF2Q15853 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
USF2Q15853 SLC9B1P1-201ENST00000331172 1337 ntBASIC4.31□□□□□ -1.72
USF2Q15853 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
USF2Q15853 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
USF2Q15853 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
USF2Q15853 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
USF2Q15853 AC007618.1-201ENST00000366455 732 ntBASIC4.31□□□□□ -1.72
USF2Q15853 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
USF2Q15853 AC004386.1-201ENST00000393214 761 ntBASIC4.31□□□□□ -1.72
USF2Q15853 AL034403.1-201ENST00000399414 885 ntBASIC4.31□□□□□ -1.72
USF2Q15853 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.31□□□□□ -1.72
USF2Q15853 CYCSP10-201ENST00000417973 294 ntBASIC4.31□□□□□ -1.72
USF2Q15853 OR2AH1P-201ENST00000425717 928 ntBASIC4.31□□□□□ -1.72
USF2Q15853 AL138785.1-201ENST00000425821 331 ntBASIC4.31□□□□□ -1.72
USF2Q15853 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
USF2Q15853 KCTD9P1-201ENST00000430462 1167 ntBASIC4.31□□□□□ -1.72
USF2Q15853 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.31□□□□□ -1.72
USF2Q15853 NDUFB4P8-201ENST00000435351 367 ntBASIC4.31□□□□□ -1.72
USF2Q15853 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.31□□□□□ -1.72
USF2Q15853 RPL12P11-201ENST00000439970 501 ntBASIC4.31□□□□□ -1.72
USF2Q15853 AC073465.2-201ENST00000440938 498 ntBASIC4.31□□□□□ -1.72
USF2Q15853 IGBP1P3-201ENST00000447449 1000 ntBASIC4.31□□□□□ -1.72
USF2Q15853 ACA64.1-201ENST00000459171 127 ntBASIC4.31□□□□□ -1.72
USF2Q15853 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.31□□□□□ -1.72
USF2Q15853 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.31□□□□□ -1.72
USF2Q15853 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
USF2Q15853 HMGB3P13-201ENST00000511263 607 ntBASIC4.31□□□□□ -1.72
USF2Q15853 AC098976.1-201ENST00000513014 541 ntBASIC4.31□□□□□ -1.72
USF2Q15853 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.31□□□□□ -1.72
USF2Q15853 AC138938.1-201ENST00000515431 782 ntBASIC4.31□□□□□ -1.72
USF2Q15853 RNA5SP464-201ENST00000516251 108 ntBASIC4.31□□□□□ -1.72
USF2Q15853 AC134698.5-201ENST00000519444 336 ntBASIC4.31□□□□□ -1.72
USF2Q15853 SMARCE1P4-201ENST00000523647 241 ntBASIC4.31□□□□□ -1.72
USF2Q15853 AC011270.1-201ENST00000558606 583 ntBASIC4.31□□□□□ -1.72
USF2Q15853 RN7SL290P-201ENST00000578661 300 ntBASIC4.31□□□□□ -1.72
USF2Q15853 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.31□□□□□ -1.72
USF2Q15853 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.31□□□□□ -1.72
USF2Q15853 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
USF2Q15853 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
USF2Q15853 AL499605.1-201ENST00000604628 403 ntBASIC4.31□□□□□ -1.72
USF2Q15853 AC034236.3-201ENST00000605999 461 ntBASIC4.31□□□□□ -1.72
USF2Q15853 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
USF2Q15853 MIR6861-201ENST00000618657 64 ntBASIC4.31□□□□□ -1.72
USF2Q15853 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC4.31□□□□□ -1.72
USF2Q15853 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC4.31□□□□□ -1.72
USF2Q15853 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.31□□□□□ -1.72
USF2Q15853 AC129778.1-202ENST00000623812 261 ntBASIC4.31□□□□□ -1.72
USF2Q15853 AL591379.1-207ENST00000635982 261 ntBASIC4.31□□□□□ -1.72
USF2Q15853 AMYH02020865.1-205ENST00000636189 261 ntBASIC4.31□□□□□ -1.72
USF2Q15853 MIR6715B-201ENST00000637172 77 ntBASIC4.31□□□□□ -1.72
USF2Q15853 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
USF2Q15853 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.31□□□□□ -1.72
USF2Q15853 OR8G3P-202ENST00000641572 1255 ntBASIC4.31□□□□□ -1.72
USF2Q15853 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
USF2Q15853 AC079298.1-201ENST00000625026 1619 ntBASIC4.31□□□□□ -1.72
USF2Q15853 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
USF2Q15853 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
USF2Q15853 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
USF2Q15853 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.31□□□□□ -1.72
USF2Q15853 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
USF2Q15853 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
USF2Q15853 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
USF2Q15853 AL450345.1-202ENST00000605741 3881 ntBASIC4.3□□□□□ -1.72
USF2Q15853 IFIT1P1-201ENST00000400497 1449 ntBASIC4.3□□□□□ -1.72
USF2Q15853 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
USF2Q15853 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.3□□□□□ -1.72
USF2Q15853 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.3□□□□□ -1.72
USF2Q15853 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
USF2Q15853 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
USF2Q15853 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
USF2Q15853 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.3□□□□□ -1.72
USF2Q15853 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.3□□□□□ -1.72
USF2Q15853 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
USF2Q15853 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
USF2Q15853 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
USF2Q15853 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
USF2Q15853 SNORA64.1-201ENST00000362600 132 ntBASIC4.3□□□□□ -1.72
USF2Q15853 RNU6-304P-201ENST00000364855 107 ntBASIC4.3□□□□□ -1.72
USF2Q15853 RNU6-225P-201ENST00000384613 103 ntBASIC4.3□□□□□ -1.72
USF2Q15853 RNA5SP241-201ENST00000391326 114 ntBASIC4.3□□□□□ -1.72
USF2Q15853 AL603766.1-201ENST00000407763 664 ntBASIC4.3□□□□□ -1.72
USF2Q15853 MIR1282-201ENST00000408865 101 ntBASIC4.3□□□□□ -1.72
USF2Q15853 LSM5-203ENST00000409782 649 ntTSL 5 BASIC4.3□□□□□ -1.72
USF2Q15853 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms