Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 ELOCP26-201ENST00000436067 329 ntBASIC6.66□□□□□ -1.34
PCDH1Q08174 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PCDH1Q08174 AL022238.1-201ENST00000442557 355 ntBASIC6.66□□□□□ -1.34
PCDH1Q08174 CRYGGP-201ENST00000443337 145 ntBASIC6.66□□□□□ -1.34
PCDH1Q08174 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC6.66□□□□□ -1.34
PCDH1Q08174 SNRPFP4-201ENST00000456366 242 ntBASIC6.66□□□□□ -1.34
PCDH1Q08174 RPL7P38-201ENST00000488396 739 ntBASIC6.66□□□□□ -1.34
PCDH1Q08174 AC073610.1-201ENST00000489971 396 ntBASIC6.66□□□□□ -1.34
PCDH1Q08174 SNX5P1-201ENST00000505757 1041 ntBASIC6.66□□□□□ -1.34
PCDH1Q08174 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
PCDH1Q08174 RPL7L1P7-201ENST00000509986 724 ntBASIC6.66□□□□□ -1.34
PCDH1Q08174 MTCYBP43-201ENST00000513621 740 ntBASIC6.66□□□□□ -1.34
PCDH1Q08174 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDH1Q08174 RNA5SP75-201ENST00000516841 111 ntBASIC6.66□□□□□ -1.34
PCDH1Q08174 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC6.66□□□□□ -1.34
PCDH1Q08174 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC6.66□□□□□ -1.34
PCDH1Q08174 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDH1Q08174 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDH1Q08174 AC103855.4-201ENST00000533158 265 ntBASIC6.66□□□□□ -1.34
PCDH1Q08174 AC069240.2-201ENST00000550242 609 ntBASIC6.66□□□□□ -1.34
PCDH1Q08174 AC092375.1-201ENST00000550410 637 ntBASIC6.66□□□□□ -1.34
PCDH1Q08174 BPTFP1-201ENST00000579209 492 ntBASIC6.66□□□□□ -1.34
PCDH1Q08174 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.66□□□□□ -1.34
PCDH1Q08174 AC015818.6-201ENST00000584274 634 ntBASIC6.66□□□□□ -1.34
PCDH1Q08174 BNIP3P9-201ENST00000603714 553 ntBASIC6.66□□□□□ -1.34
PCDH1Q08174 AC087045.1-201ENST00000605856 382 ntBASIC6.66□□□□□ -1.34
PCDH1Q08174 AC093909.6-201ENST00000624757 775 ntBASIC6.66□□□□□ -1.34
PCDH1Q08174 AC119674.1-212ENST00000641155 993 ntBASIC6.66□□□□□ -1.34
PCDH1Q08174 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
PCDH1Q08174 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDH1Q08174 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDH1Q08174 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
PCDH1Q08174 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDH1Q08174 CLCA3P-203ENST00000490028 2781 ntBASIC6.66□□□□□ -1.34
PCDH1Q08174 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
PCDH1Q08174 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDH1Q08174 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
PCDH1Q08174 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDH1Q08174 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDH1Q08174 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PCDH1Q08174 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.66□□□□□ -1.34
PCDH1Q08174 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDH1Q08174 AC092326.2-201ENST00000624772 1561 ntBASIC6.65□□□□□ -1.34
PCDH1Q08174 AC017104.4-201ENST00000636283 1592 ntBASIC6.65□□□□□ -1.34
PCDH1Q08174 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PCDH1Q08174 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.65□□□□□ -1.34
PCDH1Q08174 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.34
PCDH1Q08174 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
PCDH1Q08174 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PCDH1Q08174 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PCDH1Q08174 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PCDH1Q08174 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PCDH1Q08174 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.65□□□□□ -1.34
PCDH1Q08174 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC6.65□□□□□ -1.34
PCDH1Q08174 RNU6-839P-201ENST00000363347 108 ntBASIC6.65□□□□□ -1.34
PCDH1Q08174 SNORA40.3-201ENST00000390964 122 ntBASIC6.65□□□□□ -1.34
PCDH1Q08174 RNU6-876P-201ENST00000391295 104 ntBASIC6.65□□□□□ -1.34
PCDH1Q08174 RPL23AP47-201ENST00000408017 460 ntBASIC6.65□□□□□ -1.34
PCDH1Q08174 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.65□□□□□ -1.34
PCDH1Q08174 RNA5SP231-201ENST00000410496 138 ntBASIC6.65□□□□□ -1.34
PCDH1Q08174 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.65□□□□□ -1.34
PCDH1Q08174 AL713922.1-201ENST00000416477 747 ntBASIC6.65□□□□□ -1.34
PCDH1Q08174 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.65□□□□□ -1.34
PCDH1Q08174 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
PCDH1Q08174 AC007365.2-201ENST00000428806 458 ntBASIC6.65□□□□□ -1.34
PCDH1Q08174 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC6.65□□□□□ -1.34
PCDH1Q08174 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.65□□□□□ -1.34
PCDH1Q08174 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC6.65□□□□□ -1.34
PCDH1Q08174 OSTCP2-201ENST00000437956 444 ntBASIC6.65□□□□□ -1.34
PCDH1Q08174 AL450263.2-201ENST00000439400 589 ntBASIC6.65□□□□□ -1.34
PCDH1Q08174 GOT2P2-201ENST00000450663 1251 ntBASIC6.65□□□□□ -1.34
PCDH1Q08174 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.65□□□□□ -1.34
PCDH1Q08174 AC091951.2-201ENST00000500762 203 ntBASIC6.65□□□□□ -1.34
PCDH1Q08174 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
PCDH1Q08174 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC6.65□□□□□ -1.34
PCDH1Q08174 RNU6-875P-201ENST00000516488 106 ntBASIC6.65□□□□□ -1.34
PCDH1Q08174 AP005902.2-201ENST00000518393 307 ntBASIC6.65□□□□□ -1.34
PCDH1Q08174 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC6.65□□□□□ -1.34
PCDH1Q08174 IGHVII-49-1-201ENST00000521760 224 ntBASIC6.65□□□□□ -1.34
PCDH1Q08174 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC6.65□□□□□ -1.34
PCDH1Q08174 OSBPL9P2-201ENST00000526582 1228 ntBASIC6.65□□□□□ -1.34
PCDH1Q08174 SSU72P6-201ENST00000532644 488 ntBASIC6.65□□□□□ -1.34
PCDH1Q08174 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC6.65□□□□□ -1.34
PCDH1Q08174 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
PCDH1Q08174 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.65□□□□□ -1.34
PCDH1Q08174 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC6.65□□□□□ -1.34
PCDH1Q08174 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC6.65□□□□□ -1.34
PCDH1Q08174 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.65□□□□□ -1.34
PCDH1Q08174 AC090774.2-201ENST00000584708 322 ntBASIC6.65□□□□□ -1.34
PCDH1Q08174 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
PCDH1Q08174 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC6.65□□□□□ -1.34
PCDH1Q08174 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.65□□□□□ -1.34
PCDH1Q08174 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC6.65□□□□□ -1.34
PCDH1Q08174 AL035410.2-201ENST00000604963 864 ntBASIC6.65□□□□□ -1.34
PCDH1Q08174 AC122710.3-201ENST00000606566 541 ntBASIC6.65□□□□□ -1.34
PCDH1Q08174 AL354760.1-201ENST00000608357 643 ntBASIC6.65□□□□□ -1.34
PCDH1Q08174 AC012629.3-201ENST00000623397 328 ntBASIC6.65□□□□□ -1.34
PCDH1Q08174 AC018692.2-201ENST00000624130 348 ntBASIC6.65□□□□□ -1.34
PCDH1Q08174 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PCDH1Q08174 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms