Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 RN7SL30P-201ENST00000488416 306 ntBASIC5.11□□□□□ -1.59
LTBQ06643 OR2A3P-201ENST00000493774 953 ntBASIC5.11□□□□□ -1.59
LTBQ06643 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.11□□□□□ -1.59
LTBQ06643 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC5.11□□□□□ -1.59
LTBQ06643 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.11□□□□□ -1.59
LTBQ06643 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.11□□□□□ -1.59
LTBQ06643 SNORA70.20-201ENST00000516848 126 ntBASIC5.11□□□□□ -1.59
LTBQ06643 RNU6-889P-201ENST00000517189 103 ntBASIC5.11□□□□□ -1.59
LTBQ06643 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.11□□□□□ -1.59
LTBQ06643 UBTFL9-201ENST00000534504 1148 ntBASIC5.11□□□□□ -1.59
LTBQ06643 AC023538.1-201ENST00000534576 736 ntBASIC5.11□□□□□ -1.59
LTBQ06643 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.11□□□□□ -1.59
LTBQ06643 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.11□□□□□ -1.59
LTBQ06643 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.11□□□□□ -1.59
LTBQ06643 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.11□□□□□ -1.59
LTBQ06643 AC090666.1-201ENST00000578241 445 ntBASIC5.11□□□□□ -1.59
LTBQ06643 AC040904.1-201ENST00000590850 223 ntBASIC5.11□□□□□ -1.59
LTBQ06643 AC093424.1-201ENST00000604999 338 ntBASIC5.11□□□□□ -1.59
LTBQ06643 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.11□□□□□ -1.59
LTBQ06643 AC018628.1-201ENST00000624147 3819 ntBASIC5.11□□□□□ -1.59
LTBQ06643 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LTBQ06643 AC009501.3-201ENST00000605001 1352 ntBASIC5.11□□□□□ -1.59
LTBQ06643 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LTBQ06643 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
LTBQ06643 HSPD1P7-201ENST00000447985 1686 ntBASIC5.11□□□□□ -1.59
LTBQ06643 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.11□□□□□ -1.59
LTBQ06643 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.11□□□□□ -1.59
LTBQ06643 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LTBQ06643 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LTBQ06643 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LTBQ06643 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
LTBQ06643 AC006206.1-201ENST00000544842 3387 ntBASIC5.1□□□□□ -1.59
LTBQ06643 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
LTBQ06643 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.1□□□□□ -1.59
LTBQ06643 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
LTBQ06643 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
LTBQ06643 AL121886.1-201ENST00000358609 435 ntBASIC5.1□□□□□ -1.59
LTBQ06643 RNA5SP30-201ENST00000365552 115 ntBASIC5.1□□□□□ -1.59
LTBQ06643 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LTBQ06643 OR7E101P-201ENST00000400428 513 ntBASIC5.1□□□□□ -1.59
LTBQ06643 NACAP7-201ENST00000407371 609 ntBASIC5.1□□□□□ -1.59
LTBQ06643 RN7SKP125-201ENST00000410481 302 ntBASIC5.1□□□□□ -1.59
LTBQ06643 VN1R51P-201ENST00000411675 945 ntBASIC5.1□□□□□ -1.59
LTBQ06643 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
LTBQ06643 AC009784.1-201ENST00000426484 460 ntBASIC5.1□□□□□ -1.59
LTBQ06643 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.1□□□□□ -1.59
LTBQ06643 TRBV26OR9-2-201ENST00000432077 293 ntBASIC5.1□□□□□ -1.59
LTBQ06643 ZNF965P-201ENST00000432501 817 ntBASIC5.1□□□□□ -1.59
LTBQ06643 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LTBQ06643 AL512661.1-201ENST00000434586 1253 ntBASIC5.1□□□□□ -1.59
LTBQ06643 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.1□□□□□ -1.59
LTBQ06643 MTCO2P20-201ENST00000437339 673 ntBASIC5.1□□□□□ -1.59
LTBQ06643 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC5.1□□□□□ -1.59
LTBQ06643 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.1□□□□□ -1.59
LTBQ06643 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.1□□□□□ -1.59
LTBQ06643 MTND2P6-201ENST00000455337 1030 ntBASIC5.1□□□□□ -1.59
LTBQ06643 SNORD125-201ENST00000459538 96 ntBASIC5.1□□□□□ -1.59
LTBQ06643 RPS23P6-201ENST00000466136 431 ntBASIC5.1□□□□□ -1.59
LTBQ06643 COPS8P2-201ENST00000473228 627 ntBASIC5.1□□□□□ -1.59
LTBQ06643 OR2AO1P-201ENST00000476497 403 ntBASIC5.1□□□□□ -1.59
LTBQ06643 NPM1P17-201ENST00000479221 602 ntBASIC5.1□□□□□ -1.59
LTBQ06643 AC093663.2-201ENST00000484625 313 ntBASIC5.1□□□□□ -1.59
LTBQ06643 RN7SL423P-201ENST00000486202 304 ntBASIC5.1□□□□□ -1.59
LTBQ06643 AC090543.1-201ENST00000492168 485 ntBASIC5.1□□□□□ -1.59
LTBQ06643 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.1□□□□□ -1.59
LTBQ06643 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LTBQ06643 MTCYBP35-201ENST00000503630 1137 ntBASIC5.1□□□□□ -1.59
LTBQ06643 NENFP3-201ENST00000503735 313 ntBASIC5.1□□□□□ -1.59
LTBQ06643 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.1□□□□□ -1.59
LTBQ06643 AC093720.1-201ENST00000505681 714 ntBASIC5.1□□□□□ -1.59
LTBQ06643 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.1□□□□□ -1.59
LTBQ06643 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC5.1□□□□□ -1.59
LTBQ06643 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.1□□□□□ -1.59
LTBQ06643 AC074087.1-201ENST00000512059 724 ntBASIC5.1□□□□□ -1.59
LTBQ06643 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.1□□□□□ -1.59
LTBQ06643 AC103833.1-201ENST00000517442 172 ntBASIC5.1□□□□□ -1.59
LTBQ06643 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.1□□□□□ -1.59
LTBQ06643 AC021451.1-201ENST00000523498 1129 ntBASIC5.1□□□□□ -1.59
LTBQ06643 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
LTBQ06643 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.1□□□□□ -1.59
LTBQ06643 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.1□□□□□ -1.59
LTBQ06643 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.1□□□□□ -1.59
LTBQ06643 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC5.1□□□□□ -1.59
LTBQ06643 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.1□□□□□ -1.59
LTBQ06643 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.1□□□□□ -1.59
LTBQ06643 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.1□□□□□ -1.59
LTBQ06643 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.1□□□□□ -1.59
LTBQ06643 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.1□□□□□ -1.59
LTBQ06643 AL133247.2-201ENST00000603236 482 ntBASIC5.1□□□□□ -1.59
LTBQ06643 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.1□□□□□ -1.59
LTBQ06643 AC007275.1-201ENST00000621243 671 ntBASIC5.1□□□□□ -1.59
LTBQ06643 AC006963.1-201ENST00000624003 1052 ntBASIC5.1□□□□□ -1.59
LTBQ06643 PWAR1-201ENST00000624188 2414 ntBASIC5.1□□□□□ -1.59
LTBQ06643 AC126544.2-201ENST00000625174 749 ntBASIC5.1□□□□□ -1.59
LTBQ06643 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC5.1□□□□□ -1.59
LTBQ06643 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.1□□□□□ -1.59
LTBQ06643 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LTBQ06643 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LTBQ06643 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
LTBQ06643 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms