Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 RPS29P33-201ENST00000456717 146 ntBASIC5.88□□□□□ -1.47
GABPAQ06546 RPL23AP56-201ENST00000460778 453 ntBASIC5.88□□□□□ -1.47
GABPAQ06546 PPP1R11P1-201ENST00000486095 376 ntBASIC5.88□□□□□ -1.47
GABPAQ06546 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.88□□□□□ -1.47
GABPAQ06546 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.88□□□□□ -1.47
GABPAQ06546 AC002456.2-201ENST00000509356 380 ntBASIC5.88□□□□□ -1.47
GABPAQ06546 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.88□□□□□ -1.47
GABPAQ06546 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.88□□□□□ -1.47
GABPAQ06546 AC063949.1-201ENST00000552900 865 ntBASIC5.88□□□□□ -1.47
GABPAQ06546 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.88□□□□□ -1.47
GABPAQ06546 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.88□□□□□ -1.47
GABPAQ06546 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.88□□□□□ -1.47
GABPAQ06546 AC068790.7-201ENST00000602347 528 ntBASIC5.88□□□□□ -1.47
GABPAQ06546 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.88□□□□□ -1.47
GABPAQ06546 uc_338.18-201ENST00000615451 175 ntBASIC5.88□□□□□ -1.47
GABPAQ06546 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.88□□□□□ -1.47
GABPAQ06546 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
GABPAQ06546 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
GABPAQ06546 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
GABPAQ06546 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
GABPAQ06546 NCOA4P2-201ENST00000340589 1813 ntBASIC5.88□□□□□ -1.47
GABPAQ06546 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.88□□□□□ -1.47
GABPAQ06546 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.88□□□□□ -1.47
GABPAQ06546 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.88□□□□□ -1.47
GABPAQ06546 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.87□□□□□ -1.47
GABPAQ06546 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
GABPAQ06546 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
GABPAQ06546 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.87□□□□□ -1.47
GABPAQ06546 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.87□□□□□ -1.47
GABPAQ06546 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
GABPAQ06546 RNA5SP191-201ENST00000362585 102 ntBASIC5.87□□□□□ -1.47
GABPAQ06546 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
GABPAQ06546 SNORA70.10-201ENST00000384515 134 ntBASIC5.87□□□□□ -1.47
GABPAQ06546 GAPDHP15-201ENST00000398586 975 ntBASIC5.87□□□□□ -1.47
GABPAQ06546 LRRC37BP1-201ENST00000398851 714 ntBASIC5.87□□□□□ -1.47
GABPAQ06546 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
GABPAQ06546 RN7SKP100-201ENST00000411258 284 ntBASIC5.87□□□□□ -1.47
GABPAQ06546 RPL26P29-201ENST00000415623 438 ntBASIC5.87□□□□□ -1.47
GABPAQ06546 HYALP1-201ENST00000417674 1279 ntBASIC5.87□□□□□ -1.47
GABPAQ06546 RPL5P25-201ENST00000441148 775 ntBASIC5.87□□□□□ -1.47
GABPAQ06546 MTCO3P17-201ENST00000443775 513 ntBASIC5.87□□□□□ -1.47
GABPAQ06546 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.87□□□□□ -1.47
GABPAQ06546 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.87□□□□□ -1.47
GABPAQ06546 RNA5SP228-201ENST00000516232 133 ntBASIC5.87□□□□□ -1.47
GABPAQ06546 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.87□□□□□ -1.47
GABPAQ06546 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.87□□□□□ -1.47
GABPAQ06546 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.87□□□□□ -1.47
GABPAQ06546 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.87□□□□□ -1.47
GABPAQ06546 AC115989.2-201ENST00000578640 563 ntBASIC5.87□□□□□ -1.47
GABPAQ06546 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.87□□□□□ -1.47
GABPAQ06546 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.87□□□□□ -1.47
GABPAQ06546 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
GABPAQ06546 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
GABPAQ06546 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.87□□□□□ -1.47
GABPAQ06546 AC099654.2-201ENST00000433031 1980 ntBASIC5.87□□□□□ -1.47
GABPAQ06546 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.87□□□□□ -1.47
GABPAQ06546 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.87□□□□□ -1.47
GABPAQ06546 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GABPAQ06546 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.86□□□□□ -1.47
GABPAQ06546 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.86□□□□□ -1.47
GABPAQ06546 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
GABPAQ06546 SDAD1P1-202ENST00000524156 2051 ntBASIC5.86□□□□□ -1.47
GABPAQ06546 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GABPAQ06546 ECM1P2-201ENST00000503354 1577 ntBASIC5.86□□□□□ -1.47
GABPAQ06546 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GABPAQ06546 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.86□□□□□ -1.47
GABPAQ06546 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.86□□□□□ -1.47
GABPAQ06546 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.86□□□□□ -1.47
GABPAQ06546 AURKAPS2-201ENST00000454983 333 ntBASIC5.86□□□□□ -1.47
GABPAQ06546 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
GABPAQ06546 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GABPAQ06546 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GABPAQ06546 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.86□□□□□ -1.47
GABPAQ06546 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.86□□□□□ -1.47
GABPAQ06546 NDUFB4P11-201ENST00000560510 395 ntBASIC5.86□□□□□ -1.47
GABPAQ06546 AC040958.1-201ENST00000561102 201 ntBASIC5.86□□□□□ -1.47
GABPAQ06546 TVP23CP2-201ENST00000571473 623 ntBASIC5.86□□□□□ -1.47
GABPAQ06546 MIR3667-201ENST00000581025 74 ntBASIC5.86□□□□□ -1.47
GABPAQ06546 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.86□□□□□ -1.47
GABPAQ06546 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.86□□□□□ -1.47
GABPAQ06546 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.86□□□□□ -1.47
GABPAQ06546 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GABPAQ06546 AC005261.2-201ENST00000593427 4258 ntBASIC5.86□□□□□ -1.47
GABPAQ06546 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.86□□□□□ -1.47
GABPAQ06546 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
GABPAQ06546 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.86□□□□□ -1.47
GABPAQ06546 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
GABPAQ06546 AC090220.1-201ENST00000593078 1699 ntBASIC5.85□□□□□ -1.47
GABPAQ06546 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.85□□□□□ -1.47
GABPAQ06546 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.85□□□□□ -1.47
GABPAQ06546 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.85□□□□□ -1.47
GABPAQ06546 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
GABPAQ06546 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
GABPAQ06546 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
GABPAQ06546 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.85□□□□□ -1.47
GABPAQ06546 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
GABPAQ06546 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.85□□□□□ -1.47
GABPAQ06546 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.85□□□□□ -1.47
GABPAQ06546 AC011753.3-201ENST00000443436 406 ntBASIC5.85□□□□□ -1.47
GABPAQ06546 AC004980.3-201ENST00000447046 365 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms