Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HIST1H1AQ02539 TOPORSLP1-201ENST00000467693 2102 ntBASIC3.95□□□□□ -1.78
HIST1H1AQ02539 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC3.95□□□□□ -1.78
HIST1H1AQ02539 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
HIST1H1AQ02539 LCMT1-AS2-202ENST00000565214 5666 ntBASIC3.95□□□□□ -1.78
HIST1H1AQ02539 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC3.95□□□□□ -1.78
HIST1H1AQ02539 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
HIST1H1AQ02539 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HIST1H1AQ02539 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
HIST1H1AQ02539 MIR133B-201ENST00000362210 119 ntBASIC3.95□□□□□ -1.78
HIST1H1AQ02539 BPHL-201ENST00000380368 797 ntTSL 5 BASIC3.95□□□□□ -1.78
HIST1H1AQ02539 MIR589-201ENST00000385238 99 ntBASIC3.95□□□□□ -1.78
HIST1H1AQ02539 AC007068.1-201ENST00000396690 844 ntBASIC3.95□□□□□ -1.78
HIST1H1AQ02539 OR51A6P-201ENST00000418680 1004 ntBASIC3.95□□□□□ -1.78
HIST1H1AQ02539 PPP2R2DP1-201ENST00000420526 637 ntBASIC3.95□□□□□ -1.78
HIST1H1AQ02539 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC3.95□□□□□ -1.78
HIST1H1AQ02539 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.95□□□□□ -1.78
HIST1H1AQ02539 AL161722.2-201ENST00000434731 981 ntBASIC3.95□□□□□ -1.78
HIST1H1AQ02539 AL390119.1-201ENST00000440329 312 ntBASIC3.95□□□□□ -1.78
HIST1H1AQ02539 CYCSP34-201ENST00000458172 304 ntBASIC3.95□□□□□ -1.78
HIST1H1AQ02539 AC100832.1-201ENST00000471945 383 ntBASIC3.95□□□□□ -1.78
HIST1H1AQ02539 AC058823.1-201ENST00000485315 474 ntBASIC3.95□□□□□ -1.78
HIST1H1AQ02539 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC3.95□□□□□ -1.78
HIST1H1AQ02539 RN7SL447P-201ENST00000494711 245 ntBASIC3.95□□□□□ -1.78
HIST1H1AQ02539 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC3.95□□□□□ -1.78
HIST1H1AQ02539 AC074087.1-201ENST00000512059 724 ntBASIC3.95□□□□□ -1.78
HIST1H1AQ02539 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC3.95□□□□□ -1.78
HIST1H1AQ02539 AC134698.5-201ENST00000519444 336 ntBASIC3.95□□□□□ -1.78
HIST1H1AQ02539 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC3.95□□□□□ -1.78
HIST1H1AQ02539 YWHABP2-201ENST00000540201 713 ntBASIC3.95□□□□□ -1.78
HIST1H1AQ02539 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC3.95□□□□□ -1.78
HIST1H1AQ02539 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC3.95□□□□□ -1.78
HIST1H1AQ02539 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC3.95□□□□□ -1.78
HIST1H1AQ02539 RN7SL708P-201ENST00000580952 299 ntBASIC3.95□□□□□ -1.78
HIST1H1AQ02539 MIR1273E-201ENST00000581165 102 ntBASIC3.95□□□□□ -1.78
HIST1H1AQ02539 AC011840.5-201ENST00000582125 771 ntBASIC3.95□□□□□ -1.78
HIST1H1AQ02539 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC3.95□□□□□ -1.78
HIST1H1AQ02539 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC3.95□□□□□ -1.78
HIST1H1AQ02539 AC000068.2-201ENST00000608816 460 ntBASIC3.95□□□□□ -1.78
HIST1H1AQ02539 AC009704.2-201ENST00000618739 483 ntBASIC3.95□□□□□ -1.78
HIST1H1AQ02539 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC3.95□□□□□ -1.78
HIST1H1AQ02539 AC132825.8-201ENST00000640783 297 ntBASIC3.95□□□□□ -1.78
HIST1H1AQ02539 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HIST1H1AQ02539 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC3.95□□□□□ -1.78
HIST1H1AQ02539 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HIST1H1AQ02539 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HIST1H1AQ02539 TLK1P1-201ENST00000456760 2440 ntBASIC3.95□□□□□ -1.78
HIST1H1AQ02539 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HIST1H1AQ02539 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HIST1H1AQ02539 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC3.95□□□□□ -1.78
HIST1H1AQ02539 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
HIST1H1AQ02539 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HIST1H1AQ02539 ALB-209ENST00000503124 1741 ntTSL 5 BASIC3.95□□□□□ -1.78
HIST1H1AQ02539 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HIST1H1AQ02539 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
HIST1H1AQ02539 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HIST1H1AQ02539 AC006210.2-201ENST00000367074 1545 ntBASIC3.95□□□□□ -1.78
HIST1H1AQ02539 OR51C1P-202ENST00000641159 1444 ntBASIC3.95□□□□□ -1.78
HIST1H1AQ02539 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HIST1H1AQ02539 AC027290.2-201ENST00000623210 18662 ntBASIC3.94□□□□□ -1.78
HIST1H1AQ02539 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
HIST1H1AQ02539 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HIST1H1AQ02539 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
HIST1H1AQ02539 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HIST1H1AQ02539 RNF19BPY-201ENST00000458209 1550 ntBASIC3.94□□□□□ -1.78
HIST1H1AQ02539 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HIST1H1AQ02539 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
HIST1H1AQ02539 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC3.94□□□□□ -1.78
HIST1H1AQ02539 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HIST1H1AQ02539 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HIST1H1AQ02539 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
HIST1H1AQ02539 FIG4-202ENST00000368941 791 ntTSL 3 BASIC3.94□□□□□ -1.78
HIST1H1AQ02539 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HIST1H1AQ02539 SSX3-202ENST00000376893 800 ntTSL 2 BASIC3.94□□□□□ -1.78
HIST1H1AQ02539 EIF4A1P1-201ENST00000420241 934 ntBASIC3.94□□□□□ -1.78
HIST1H1AQ02539 GTF2IP2-201ENST00000424290 697 ntBASIC3.94□□□□□ -1.78
HIST1H1AQ02539 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC3.94□□□□□ -1.78
HIST1H1AQ02539 NAP1L4P2-201ENST00000425958 899 ntBASIC3.94□□□□□ -1.78
HIST1H1AQ02539 CLUHP1-201ENST00000435012 1190 ntBASIC3.94□□□□□ -1.78
HIST1H1AQ02539 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC3.94□□□□□ -1.78
HIST1H1AQ02539 AL138899.2-201ENST00000439139 499 ntBASIC3.94□□□□□ -1.78
HIST1H1AQ02539 AL161636.2-201ENST00000445179 927 ntBASIC3.94□□□□□ -1.78
HIST1H1AQ02539 PTMAP3-201ENST00000447474 330 ntBASIC3.94□□□□□ -1.78
HIST1H1AQ02539 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC3.94□□□□□ -1.78
HIST1H1AQ02539 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC3.94□□□□□ -1.78
HIST1H1AQ02539 AC104634.1-201ENST00000452720 462 ntBASIC3.94□□□□□ -1.78
HIST1H1AQ02539 RANP1-206ENST00000455094 651 ntBASIC3.94□□□□□ -1.78
HIST1H1AQ02539 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC3.94□□□□□ -1.78
HIST1H1AQ02539 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
HIST1H1AQ02539 NIFKP7-201ENST00000503365 834 ntBASIC3.94□□□□□ -1.78
HIST1H1AQ02539 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC3.94□□□□□ -1.78
HIST1H1AQ02539 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC3.94□□□□□ -1.78
HIST1H1AQ02539 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC3.94□□□□□ -1.78
HIST1H1AQ02539 IGHVII-60-1-201ENST00000519079 256 ntBASIC3.94□□□□□ -1.78
HIST1H1AQ02539 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC3.94□□□□□ -1.78
HIST1H1AQ02539 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HIST1H1AQ02539 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC3.94□□□□□ -1.78
HIST1H1AQ02539 BLZF2P-201ENST00000553776 1130 ntBASIC3.94□□□□□ -1.78
HIST1H1AQ02539 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.94□□□□□ -1.78
HIST1H1AQ02539 AC022404.1-201ENST00000555320 273 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms