Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
CCL20P78556 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCL20P78556 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCL20P78556 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC3.84□□□□□ -1.79
CCL20P78556 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCL20P78556 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCL20P78556 RN7SKP113-201ENST00000363891 295 ntBASIC3.84□□□□□ -1.79
CCL20P78556 SNORA70.10-201ENST00000384515 134 ntBASIC3.84□□□□□ -1.79
CCL20P78556 RN7SKP240-201ENST00000410583 375 ntBASIC3.84□□□□□ -1.79
CCL20P78556 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC3.84□□□□□ -1.79
CCL20P78556 PTP4A1P1-201ENST00000420539 515 ntBASIC3.84□□□□□ -1.79
CCL20P78556 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.84□□□□□ -1.79
CCL20P78556 FMO7P-201ENST00000436045 768 ntBASIC3.84□□□□□ -1.79
CCL20P78556 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC3.84□□□□□ -1.79
CCL20P78556 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.84□□□□□ -1.79
CCL20P78556 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC3.84□□□□□ -1.79
CCL20P78556 AC010469.1-201ENST00000463864 576 ntBASIC3.84□□□□□ -1.79
CCL20P78556 RN7SL558P-201ENST00000497468 299 ntBASIC3.84□□□□□ -1.79
CCL20P78556 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC3.84□□□□□ -1.79
CCL20P78556 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC3.84□□□□□ -1.79
CCL20P78556 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.84□□□□□ -1.79
CCL20P78556 AP001000.1-201ENST00000526843 742 ntBASIC3.84□□□□□ -1.79
CCL20P78556 DERA-209ENST00000532964 854 ntTSL 5 BASIC3.84□□□□□ -1.79
CCL20P78556 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCL20P78556 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC3.84□□□□□ -1.79
CCL20P78556 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC3.84□□□□□ -1.79
CCL20P78556 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC3.84□□□□□ -1.79
CCL20P78556 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.84□□□□□ -1.79
CCL20P78556 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC3.84□□□□□ -1.79
CCL20P78556 RPL26P30-202ENST00000602923 645 ntBASIC3.84□□□□□ -1.79
CCL20P78556 AC000068.2-201ENST00000608816 460 ntBASIC3.84□□□□□ -1.79
CCL20P78556 AC008115.3-201ENST00000614874 549 ntBASIC3.84□□□□□ -1.79
CCL20P78556 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC3.84□□□□□ -1.79
CCL20P78556 MIR7154-201ENST00000620673 73 ntBASIC3.84□□□□□ -1.79
CCL20P78556 AC006840.1-201ENST00000623069 542 ntBASIC3.84□□□□□ -1.79
CCL20P78556 AC007603.3-201ENST00000636915 979 ntBASIC3.84□□□□□ -1.79
CCL20P78556 AC135068.12-201ENST00000637370 931 ntBASIC3.84□□□□□ -1.79
CCL20P78556 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC3.84□□□□□ -1.79
CCL20P78556 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC3.84□□□□□ -1.79
CCL20P78556 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC3.84□□□□□ -1.8
CCL20P78556 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.84□□□□□ -1.8
CCL20P78556 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC3.84□□□□□ -1.8
CCL20P78556 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CCL20P78556 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
CCL20P78556 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.84□□□□□ -1.8
CCL20P78556 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.84□□□□□ -1.8
CCL20P78556 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCL20P78556 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCL20P78556 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CCL20P78556 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCL20P78556 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCL20P78556 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCL20P78556 RNA5SP52-201ENST00000362448 134 ntBASIC3.83□□□□□ -1.8
CCL20P78556 RNU1-108P-201ENST00000362556 161 ntBASIC3.83□□□□□ -1.8
CCL20P78556 MIR431-201ENST00000385266 114 ntBASIC3.83□□□□□ -1.8
CCL20P78556 GAPDHP15-201ENST00000398586 975 ntBASIC3.83□□□□□ -1.8
CCL20P78556 SNORA77-201ENST00000408716 125 ntBASIC3.83□□□□□ -1.8
CCL20P78556 SDHDP6-201ENST00000414693 480 ntBASIC3.83□□□□□ -1.8
CCL20P78556 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.83□□□□□ -1.8
CCL20P78556 MYB-206ENST00000420123 1051 ntTSL 5 BASIC3.83□□□□□ -1.8
CCL20P78556 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC3.83□□□□□ -1.8
CCL20P78556 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC3.83□□□□□ -1.8
CCL20P78556 RPS4XP16-201ENST00000427198 791 ntBASIC3.83□□□□□ -1.8
CCL20P78556 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC3.83□□□□□ -1.8
CCL20P78556 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC3.83□□□□□ -1.8
CCL20P78556 SNRPFP2-201ENST00000440710 251 ntBASIC3.83□□□□□ -1.8
CCL20P78556 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
CCL20P78556 ATP5A1P7-201ENST00000453978 1279 ntBASIC3.83□□□□□ -1.8
CCL20P78556 ACA64.1-201ENST00000459171 127 ntBASIC3.83□□□□□ -1.8
CCL20P78556 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC3.83□□□□□ -1.8
CCL20P78556 AC098583.1-201ENST00000480875 255 ntBASIC3.83□□□□□ -1.8
CCL20P78556 AL136038.1-201ENST00000497246 351 ntBASIC3.83□□□□□ -1.8
CCL20P78556 AC122718.2-201ENST00000505325 591 ntBASIC3.83□□□□□ -1.8
CCL20P78556 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC3.83□□□□□ -1.8
CCL20P78556 RNA5SP96-201ENST00000516041 107 ntBASIC3.83□□□□□ -1.8
CCL20P78556 Vault.2-201ENST00000516519 98 ntBASIC3.83□□□□□ -1.8
CCL20P78556 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC3.83□□□□□ -1.8
CCL20P78556 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC3.83□□□□□ -1.8
CCL20P78556 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCL20P78556 MTND6P33-201ENST00000571794 183 ntBASIC3.83□□□□□ -1.8
CCL20P78556 AP001496.3-201ENST00000580230 913 ntBASIC3.83□□□□□ -1.8
CCL20P78556 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC3.83□□□□□ -1.8
CCL20P78556 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC3.83□□□□□ -1.8
CCL20P78556 AC023509.5-201ENST00000617434 807 ntBASIC3.83□□□□□ -1.8
CCL20P78556 AC012414.7-202ENST00000622705 1090 ntBASIC3.83□□□□□ -1.8
CCL20P78556 AC129778.1-202ENST00000623812 261 ntBASIC3.83□□□□□ -1.8
CCL20P78556 AL591379.1-207ENST00000635982 261 ntBASIC3.83□□□□□ -1.8
CCL20P78556 AMYH02020865.1-205ENST00000636189 261 ntBASIC3.83□□□□□ -1.8
CCL20P78556 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCL20P78556 AC235565.1-201ENST00000456962 1325 ntBASIC3.83□□□□□ -1.8
CCL20P78556 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCL20P78556 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCL20P78556 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC3.83□□□□□ -1.8
CCL20P78556 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC3.83□□□□□ -1.8
CCL20P78556 KPNA2P2-201ENST00000419546 1489 ntBASIC3.83□□□□□ -1.8
CCL20P78556 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCL20P78556 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CCL20P78556 CD86-204ENST00000469710 1604 ntTSL 2 BASIC3.83□□□□□ -1.8
CCL20P78556 AC245100.2-201ENST00000454544 1679 ntBASIC3.83□□□□□ -1.8
CCL20P78556 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms