Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.34□□□□□ -1.55
RAE1P78406 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.55
RAE1P78406 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.34□□□□□ -1.55
RAE1P78406 NXF4-202ENST00000416098 1465 ntBASIC5.34□□□□□ -1.55
RAE1P78406 MTCO1P18-201ENST00000455518 1419 ntBASIC5.34□□□□□ -1.55
RAE1P78406 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.34□□□□□ -1.55
RAE1P78406 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RAE1P78406 RN7SKP145-201ENST00000363291 303 ntBASIC5.34□□□□□ -1.55
RAE1P78406 RNU6-236P-201ENST00000363886 106 ntBASIC5.34□□□□□ -1.55
RAE1P78406 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.34□□□□□ -1.55
RAE1P78406 U6.112-201ENST00000384129 70 ntBASIC5.34□□□□□ -1.55
RAE1P78406 LYPLA1P3-201ENST00000402650 695 ntBASIC5.34□□□□□ -1.55
RAE1P78406 RPL7P27-201ENST00000403775 720 ntBASIC5.34□□□□□ -1.55
RAE1P78406 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.34□□□□□ -1.55
RAE1P78406 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.34□□□□□ -1.55
RAE1P78406 AL590806.1-201ENST00000415818 853 ntBASIC5.34□□□□□ -1.55
RAE1P78406 AL449283.1-202ENST00000418249 604 ntBASIC5.34□□□□□ -1.55
RAE1P78406 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.34□□□□□ -1.55
RAE1P78406 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.34□□□□□ -1.55
RAE1P78406 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.34□□□□□ -1.55
RAE1P78406 RPL5P2-201ENST00000429598 854 ntBASIC5.34□□□□□ -1.55
RAE1P78406 AC006335.2-201ENST00000437993 330 ntBASIC5.34□□□□□ -1.55
RAE1P78406 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RAE1P78406 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.34□□□□□ -1.55
RAE1P78406 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.34□□□□□ -1.55
RAE1P78406 AZGP1P2-201ENST00000454506 345 ntBASIC5.34□□□□□ -1.55
RAE1P78406 NXT1P1-201ENST00000458481 316 ntBASIC5.34□□□□□ -1.55
RAE1P78406 RPS4XP6-201ENST00000477670 797 ntBASIC5.34□□□□□ -1.55
RAE1P78406 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.34□□□□□ -1.55
RAE1P78406 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.34□□□□□ -1.55
RAE1P78406 AC119751.5-201ENST00000514077 770 ntBASIC5.34□□□□□ -1.55
RAE1P78406 SNORA70.20-201ENST00000516848 126 ntBASIC5.34□□□□□ -1.55
RAE1P78406 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.34□□□□□ -1.55
RAE1P78406 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.34□□□□□ -1.55
RAE1P78406 UBTFL10-201ENST00000528532 562 ntBASIC5.34□□□□□ -1.55
RAE1P78406 PMS2P3-207ENST00000529061 717 ntBASIC5.34□□□□□ -1.55
RAE1P78406 AC005363.1-201ENST00000530779 351 ntBASIC5.34□□□□□ -1.55
RAE1P78406 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.34□□□□□ -1.55
RAE1P78406 HMGB1P42-201ENST00000532126 553 ntBASIC5.34□□□□□ -1.55
RAE1P78406 OR7E128P-201ENST00000532736 1024 ntBASIC5.34□□□□□ -1.55
RAE1P78406 MRPS36P5-201ENST00000551909 298 ntBASIC5.34□□□□□ -1.55
RAE1P78406 OR4U1P-201ENST00000554958 912 ntBASIC5.34□□□□□ -1.55
RAE1P78406 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.34□□□□□ -1.55
RAE1P78406 HMGN2P47-201ENST00000559378 272 ntBASIC5.34□□□□□ -1.55
RAE1P78406 SNORD39.2-201ENST00000579995 76 ntBASIC5.34□□□□□ -1.55
RAE1P78406 MIR4271-201ENST00000582451 67 ntBASIC5.34□□□□□ -1.55
RAE1P78406 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.34□□□□□ -1.55
RAE1P78406 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.34□□□□□ -1.55
RAE1P78406 AC067773.1-201ENST00000603284 1094 ntBASIC5.34□□□□□ -1.55
RAE1P78406 AL499605.1-201ENST00000604628 403 ntBASIC5.34□□□□□ -1.55
RAE1P78406 AC018618.2-201ENST00000604770 446 ntBASIC5.34□□□□□ -1.55
RAE1P78406 AC024060.1-201ENST00000607052 494 ntBASIC5.34□□□□□ -1.55
RAE1P78406 OR2BH1P-201ENST00000608850 864 ntBASIC5.34□□□□□ -1.55
RAE1P78406 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RAE1P78406 MIR6071-201ENST00000616741 78 ntBASIC5.34□□□□□ -1.55
RAE1P78406 AC010435.1-201ENST00000623353 1177 ntBASIC5.34□□□□□ -1.55
RAE1P78406 AC120349.3-201ENST00000624377 529 ntBASIC5.34□□□□□ -1.55
RAE1P78406 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.34□□□□□ -1.55
RAE1P78406 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.34□□□□□ -1.55
RAE1P78406 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
RAE1P78406 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RAE1P78406 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.34□□□□□ -1.56
RAE1P78406 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.34□□□□□ -1.56
RAE1P78406 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
RAE1P78406 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
RAE1P78406 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
RAE1P78406 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
RAE1P78406 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
RAE1P78406 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.34□□□□□ -1.56
RAE1P78406 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
RAE1P78406 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RAE1P78406 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
RAE1P78406 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RAE1P78406 CIR1P2-201ENST00000514821 1342 ntBASIC5.33□□□□□ -1.56
RAE1P78406 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RAE1P78406 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RAE1P78406 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RAE1P78406 RNA5SP394-201ENST00000364216 119 ntBASIC5.33□□□□□ -1.56
RAE1P78406 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.33□□□□□ -1.56
RAE1P78406 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
RAE1P78406 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RAE1P78406 AC233289.1-201ENST00000403700 508 ntBASIC5.33□□□□□ -1.56
RAE1P78406 RN7SKP240-201ENST00000410583 375 ntBASIC5.33□□□□□ -1.56
RAE1P78406 RPSAP35-201ENST00000413753 818 ntBASIC5.33□□□□□ -1.56
RAE1P78406 AC107081.1-201ENST00000414975 361 ntBASIC5.33□□□□□ -1.56
RAE1P78406 AL133482.1-201ENST00000415988 498 ntBASIC5.33□□□□□ -1.56
RAE1P78406 RPL22P18-201ENST00000417197 377 ntBASIC5.33□□□□□ -1.56
RAE1P78406 LINC01347-201ENST00000417964 355 ntBASIC5.33□□□□□ -1.56
RAE1P78406 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.33□□□□□ -1.56
RAE1P78406 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.33□□□□□ -1.56
RAE1P78406 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.33□□□□□ -1.56
RAE1P78406 HSPE1P16-201ENST00000426640 348 ntBASIC5.33□□□□□ -1.56
RAE1P78406 AC115283.1-201ENST00000427353 400 ntBASIC5.33□□□□□ -1.56
RAE1P78406 NDUFB4P8-201ENST00000435351 367 ntBASIC5.33□□□□□ -1.56
RAE1P78406 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.33□□□□□ -1.56
RAE1P78406 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.33□□□□□ -1.56
RAE1P78406 CR769776.1-201ENST00000441254 787 ntBASIC5.33□□□□□ -1.56
RAE1P78406 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.33□□□□□ -1.56
RAE1P78406 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.33□□□□□ -1.56
RAE1P78406 HSFY3P-201ENST00000444242 1191 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms