Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 TMSB4XP2-201ENST00000335179 210 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.49□□□□□ -1.53
CLRN1P58418 RNU6-560P-201ENST00000364007 108 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 RNU6-707P-201ENST00000364647 95 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 RNU6-185P-201ENST00000384421 107 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.49□□□□□ -1.53
CLRN1P58418 MOB4-205ENST00000409916 829 ntTSL 3 BASIC5.49□□□□□ -1.53
CLRN1P58418 RNA5SP251-201ENST00000410614 137 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC5.49□□□□□ -1.53
CLRN1P58418 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.49□□□□□ -1.53
CLRN1P58418 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.49□□□□□ -1.53
CLRN1P58418 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.49□□□□□ -1.53
CLRN1P58418 VN1R20P-201ENST00000425215 966 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 NANOGP4-201ENST00000427230 913 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 RPL23AP4-201ENST00000427757 463 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 CNOT7P1-201ENST00000429006 852 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 KCTD9P1-201ENST00000430462 1167 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLRN1P58418 HMGB1P45-201ENST00000435986 653 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 LINC00328-2P-201ENST00000436585 219 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CLRN1P58418 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC5.49□□□□□ -1.53
CLRN1P58418 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.49□□□□□ -1.53
CLRN1P58418 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.49□□□□□ -1.53
CLRN1P58418 RPS26P30-201ENST00000443431 335 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.49□□□□□ -1.53
CLRN1P58418 TAF9P1-201ENST00000445421 515 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 AL929288.2-201ENST00000446368 407 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.49□□□□□ -1.53
CLRN1P58418 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CLRN1P58418 KF459542.1-201ENST00000450908 553 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 TAF9P2-201ENST00000454958 515 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.49□□□□□ -1.53
CLRN1P58418 RN7SL352P-201ENST00000466002 277 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.49□□□□□ -1.53
CLRN1P58418 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.49□□□□□ -1.53
CLRN1P58418 AC005017.1-201ENST00000482002 490 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 RPS27P20-201ENST00000492051 246 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 AC104090.1-201ENST00000506341 1171 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 NACAP5-201ENST00000509863 636 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 AC116353.3-201ENST00000511215 249 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.49□□□□□ -1.53
CLRN1P58418 AC008837.2-201ENST00000513076 418 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 AC008494.2-201ENST00000514544 370 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.49□□□□□ -1.53
CLRN1P58418 OR5D2P-201ENST00000524390 911 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.49□□□□□ -1.53
CLRN1P58418 AC092747.2-201ENST00000545069 983 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 DUX4L52-201ENST00000549363 777 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC5.49□□□□□ -1.53
CLRN1P58418 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.49□□□□□ -1.53
CLRN1P58418 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.49□□□□□ -1.53
CLRN1P58418 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.49□□□□□ -1.53
CLRN1P58418 MIR3915-201ENST00000578518 97 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.49□□□□□ -1.53
CLRN1P58418 MIR4999-201ENST00000585029 91 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.49□□□□□ -1.53
CLRN1P58418 AP000811.1-201ENST00000603803 651 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 AC096553.1-201ENST00000605169 829 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 AC004890.3-201ENST00000605566 1095 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 RPSAP75-201ENST00000605848 301 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 AC103591.3-201ENST00000608684 209 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.49□□□□□ -1.53
CLRN1P58418 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 AL133243.1-201ENST00000614487 366 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 AC012676.3-201ENST00000614983 479 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 AC011472.4-201ENST00000615848 491 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 AL137067.2-201ENST00000621202 131 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.49□□□□□ -1.53
CLRN1P58418 AC084035.1-201ENST00000634543 607 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 AF001550.2-201ENST00000636643 217 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 U6.107-201ENST00000637108 79 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 AC010325.3-201ENST00000641084 394 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CLRN1P58418 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CLRN1P58418 AC093297.3-201ENST00000607056 2517 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 AC130360.2-201ENST00000533477 1556 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.49□□□□□ -1.53
CLRN1P58418 AP000776.1-201ENST00000530032 1663 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CLRN1P58418 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLRN1P58418 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
CLRN1P58418 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLRN1P58418 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLRN1P58418 AL390237.1-201ENST00000404226 1415 ntBASIC5.48□□□□□ -1.53
CLRN1P58418 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLRN1P58418 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
CLRN1P58418 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
CLRN1P58418 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.48□□□□□ -1.53
CLRN1P58418 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLRN1P58418 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLRN1P58418 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLRN1P58418 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLRN1P58418 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLRN1P58418 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLRN1P58418 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.48□□□□□ -1.53
CLRN1P58418 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC5.48□□□□□ -1.53
CLRN1P58418 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.48□□□□□ -1.53
CLRN1P58418 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms