Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 OR11J2P-201ENST00000555298 907 ntBASIC5.25□□□□□ -1.57
CDH6P55285 AC011840.5-201ENST00000582125 771 ntBASIC5.25□□□□□ -1.57
CDH6P55285 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.25□□□□□ -1.57
CDH6P55285 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.25□□□□□ -1.57
CDH6P55285 AC015660.5-201ENST00000623238 564 ntBASIC5.25□□□□□ -1.57
CDH6P55285 AC138965.3-201ENST00000623875 498 ntBASIC5.25□□□□□ -1.57
CDH6P55285 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.25□□□□□ -1.57
CDH6P55285 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CDH6P55285 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CDH6P55285 AL513548.1-201ENST00000562904 1724 ntBASIC5.25□□□□□ -1.57
CDH6P55285 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CDH6P55285 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH6P55285 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CDH6P55285 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CDH6P55285 AC011447.7-201ENST00000624228 1590 ntBASIC5.25□□□□□ -1.57
CDH6P55285 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH6P55285 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH6P55285 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.24□□□□□ -1.57
CDH6P55285 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.24□□□□□ -1.57
CDH6P55285 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CDH6P55285 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH6P55285 RNU6-171P-201ENST00000384354 107 ntBASIC5.24□□□□□ -1.57
CDH6P55285 SNORA77-201ENST00000408716 125 ntBASIC5.24□□□□□ -1.57
CDH6P55285 SETP10-201ENST00000424368 814 ntBASIC5.24□□□□□ -1.57
CDH6P55285 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.24□□□□□ -1.57
CDH6P55285 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.24□□□□□ -1.57
CDH6P55285 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.24□□□□□ -1.57
CDH6P55285 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH6P55285 AURKAPS1-201ENST00000451805 1212 ntBASIC5.24□□□□□ -1.57
CDH6P55285 AC093166.2-201ENST00000455969 1017 ntBASIC5.24□□□□□ -1.57
CDH6P55285 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH6P55285 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CDH6P55285 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.24□□□□□ -1.57
CDH6P55285 AC010350.1-201ENST00000504908 231 ntBASIC5.24□□□□□ -1.57
CDH6P55285 RNA5SP34-201ENST00000516887 130 ntBASIC5.24□□□□□ -1.57
CDH6P55285 AC008126.1-201ENST00000549019 480 ntBASIC5.24□□□□□ -1.57
CDH6P55285 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
CDH6P55285 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.24□□□□□ -1.57
CDH6P55285 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.24□□□□□ -1.57
CDH6P55285 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH6P55285 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.24□□□□□ -1.57
CDH6P55285 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH6P55285 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.24□□□□□ -1.57
CDH6P55285 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.24□□□□□ -1.57
CDH6P55285 AL355480.1-201ENST00000629041 99 ntBASIC5.24□□□□□ -1.57
CDH6P55285 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.24□□□□□ -1.57
CDH6P55285 AC073869.10-201ENST00000642016 354 ntBASIC5.24□□□□□ -1.57
CDH6P55285 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.24□□□□□ -1.57
CDH6P55285 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.24□□□□□ -1.57
CDH6P55285 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH6P55285 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CDH6P55285 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH6P55285 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH6P55285 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH6P55285 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CDH6P55285 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH6P55285 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CDH6P55285 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDH6P55285 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDH6P55285 AC013442.1-201ENST00000397347 228 ntBASIC5.23□□□□□ -1.57
CDH6P55285 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.23□□□□□ -1.57
CDH6P55285 U3.36-201ENST00000408418 213 ntBASIC5.23□□□□□ -1.57
CDH6P55285 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH6P55285 MTND4LP21-201ENST00000415303 295 ntBASIC5.23□□□□□ -1.57
CDH6P55285 GTF3AP1-201ENST00000416942 1004 ntBASIC5.23□□□□□ -1.57
CDH6P55285 DDX39BP1-205ENST00000422507 192 ntBASIC5.23□□□□□ -1.57
CDH6P55285 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH6P55285 RPL35AP21-201ENST00000437667 333 ntBASIC5.23□□□□□ -1.57
CDH6P55285 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH6P55285 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH6P55285 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH6P55285 KNOP1P3-201ENST00000446933 426 ntBASIC5.23□□□□□ -1.57
CDH6P55285 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.23□□□□□ -1.57
CDH6P55285 AC097484.1-201ENST00000471148 389 ntBASIC5.23□□□□□ -1.57
CDH6P55285 RPS18P6-201ENST00000476880 458 ntBASIC5.23□□□□□ -1.57
CDH6P55285 AC017007.3-201ENST00000479865 435 ntBASIC5.23□□□□□ -1.57
CDH6P55285 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.23□□□□□ -1.57
CDH6P55285 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH6P55285 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.23□□□□□ -1.57
CDH6P55285 RFPL4AP3-201ENST00000515267 345 ntBASIC5.23□□□□□ -1.57
CDH6P55285 AL671862.1-201ENST00000515851 349 ntBASIC5.23□□□□□ -1.57
CDH6P55285 RN7SKP260-201ENST00000516907 149 ntBASIC5.23□□□□□ -1.57
CDH6P55285 AC012339.2-201ENST00000523996 453 ntBASIC5.23□□□□□ -1.57
CDH6P55285 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH6P55285 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH6P55285 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.23□□□□□ -1.57
CDH6P55285 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH6P55285 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
CDH6P55285 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDH6P55285 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.23□□□□□ -1.57
CDH6P55285 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH6P55285 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH6P55285 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDH6P55285 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH6P55285 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDH6P55285 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH6P55285 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
CDH6P55285 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CDH6P55285 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
CDH6P55285 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms