Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.68□□□□□ -1.5
VCPP55072 AC092490.3-201ENST00000545370 572 ntBASIC5.68□□□□□ -1.5
VCPP55072 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.68□□□□□ -1.5
VCPP55072 MTND2P17-201ENST00000550281 688 ntBASIC5.68□□□□□ -1.5
VCPP55072 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.68□□□□□ -1.5
VCPP55072 AC108738.1-201ENST00000603703 237 ntBASIC5.68□□□□□ -1.5
VCPP55072 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.68□□□□□ -1.5
VCPP55072 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.68□□□□□ -1.5
VCPP55072 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.68□□□□□ -1.5
VCPP55072 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.68□□□□□ -1.5
VCPP55072 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VCPP55072 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
VCPP55072 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VCPP55072 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VCPP55072 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VCPP55072 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
VCPP55072 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
VCPP55072 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
VCPP55072 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VCPP55072 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
VCPP55072 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VCPP55072 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
VCPP55072 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.67□□□□□ -1.5
VCPP55072 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VCPP55072 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.67□□□□□ -1.5
VCPP55072 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
VCPP55072 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
VCPP55072 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VCPP55072 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
VCPP55072 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.67□□□□□ -1.5
VCPP55072 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.67□□□□□ -1.5
VCPP55072 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VCPP55072 AL133388.1-201ENST00000404509 287 ntBASIC5.67□□□□□ -1.5
VCPP55072 GNG5P5-201ENST00000420444 220 ntBASIC5.67□□□□□ -1.5
VCPP55072 RPL12P18-201ENST00000437175 325 ntBASIC5.67□□□□□ -1.5
VCPP55072 AL138878.2-201ENST00000440581 1241 ntBASIC5.67□□□□□ -1.5
VCPP55072 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.67□□□□□ -1.5
VCPP55072 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.67□□□□□ -1.5
VCPP55072 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.67□□□□□ -1.5
VCPP55072 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.67□□□□□ -1.5
VCPP55072 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.67□□□□□ -1.5
VCPP55072 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.67□□□□□ -1.5
VCPP55072 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.67□□□□□ -1.5
VCPP55072 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.67□□□□□ -1.5
VCPP55072 SCARNA20.4-201ENST00000516969 131 ntBASIC5.67□□□□□ -1.5
VCPP55072 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.67□□□□□ -1.5
VCPP55072 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
VCPP55072 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.67□□□□□ -1.5
VCPP55072 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5.67□□□□□ -1.5
VCPP55072 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.67□□□□□ -1.5
VCPP55072 AC010503.3-201ENST00000594355 540 ntBASIC5.67□□□□□ -1.5
VCPP55072 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.67□□□□□ -1.5
VCPP55072 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.67□□□□□ -1.5
VCPP55072 AC073869.8-201ENST00000641806 335 ntBASIC5.67□□□□□ -1.5
VCPP55072 AL031595.2-201ENST00000624215 19071 ntBASIC5.67□□□□□ -1.5
VCPP55072 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VCPP55072 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VCPP55072 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.67□□□□□ -1.5
VCPP55072 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VCPP55072 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VCPP55072 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VCPP55072 AC003973.3-201ENST00000624863 2822 ntBASIC5.66□□□□□ -1.5
VCPP55072 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.66□□□□□ -1.5
VCPP55072 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VCPP55072 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.66□□□□□ -1.5
VCPP55072 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VCPP55072 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VCPP55072 MTCO1P15-201ENST00000529569 1526 ntBASIC5.66□□□□□ -1.5
VCPP55072 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
VCPP55072 RPL32P3-201ENST00000359025 275 ntBASIC5.66□□□□□ -1.5
VCPP55072 RN7SKP113-201ENST00000363891 295 ntBASIC5.66□□□□□ -1.5
VCPP55072 RNU6-398P-201ENST00000384143 109 ntBASIC5.66□□□□□ -1.5
VCPP55072 RNA5SP241-201ENST00000391326 114 ntBASIC5.66□□□□□ -1.5
VCPP55072 RPS4XP9-201ENST00000405151 780 ntBASIC5.66□□□□□ -1.5
VCPP55072 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.66□□□□□ -1.5
VCPP55072 P2RY10P2-201ENST00000416730 913 ntBASIC5.66□□□□□ -1.5
VCPP55072 HYALP1-201ENST00000417674 1279 ntBASIC5.66□□□□□ -1.5
VCPP55072 OR5M12P-201ENST00000423388 929 ntBASIC5.66□□□□□ -1.5
VCPP55072 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.66□□□□□ -1.5
VCPP55072 DSTNP5-201ENST00000427921 523 ntBASIC5.66□□□□□ -1.5
VCPP55072 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.66□□□□□ -1.5
VCPP55072 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VCPP55072 ARAFP2-201ENST00000440565 559 ntBASIC5.66□□□□□ -1.5
VCPP55072 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.66□□□□□ -1.5
VCPP55072 NDUFA12P1-201ENST00000455914 406 ntBASIC5.66□□□□□ -1.5
VCPP55072 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.66□□□□□ -1.5
VCPP55072 IGBP1P4-201ENST00000503202 879 ntBASIC5.66□□□□□ -1.5
VCPP55072 IGBP1P5-201ENST00000507524 1000 ntBASIC5.66□□□□□ -1.5
VCPP55072 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.66□□□□□ -1.5
VCPP55072 RNU6-943P-201ENST00000516960 98 ntBASIC5.66□□□□□ -1.5
VCPP55072 AC134698.5-201ENST00000519444 336 ntBASIC5.66□□□□□ -1.5
VCPP55072 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.66□□□□□ -1.5
VCPP55072 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.66□□□□□ -1.5
VCPP55072 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VCPP55072 AC130364.2-201ENST00000528639 604 ntBASIC5.66□□□□□ -1.5
VCPP55072 OR11H3P-201ENST00000554547 982 ntBASIC5.66□□□□□ -1.5
VCPP55072 AC127381.1-201ENST00000555979 939 ntBASIC5.66□□□□□ -1.5
VCPP55072 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.66□□□□□ -1.5
VCPP55072 RN7SL290P-201ENST00000578661 300 ntBASIC5.66□□□□□ -1.5
VCPP55072 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms