Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
ATP1B3P54709 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ATP1B3P54709 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ATP1B3P54709 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
ATP1B3P54709 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.54□□□□□ -1.68
ATP1B3P54709 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ATP1B3P54709 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ATP1B3P54709 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
ATP1B3P54709 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ATP1B3P54709 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
ATP1B3P54709 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.53□□□□□ -1.68
ATP1B3P54709 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ATP1B3P54709 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
ATP1B3P54709 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ATP1B3P54709 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ATP1B3P54709 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ATP1B3P54709 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
ATP1B3P54709 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
ATP1B3P54709 MIR621-201ENST00000384919 96 ntBASIC4.53□□□□□ -1.68
ATP1B3P54709 MIR105-1-201ENST00000385222 81 ntBASIC4.53□□□□□ -1.68
ATP1B3P54709 SNORD65-201ENST00000391079 73 ntBASIC4.53□□□□□ -1.68
ATP1B3P54709 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
ATP1B3P54709 EI24P3-201ENST00000399046 1062 ntBASIC4.53□□□□□ -1.68
ATP1B3P54709 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
ATP1B3P54709 AL133388.1-201ENST00000404509 287 ntBASIC4.53□□□□□ -1.68
ATP1B3P54709 MTCYBP7-201ENST00000419540 1134 ntBASIC4.53□□□□□ -1.68
ATP1B3P54709 AC104333.2-201ENST00000422630 192 ntBASIC4.53□□□□□ -1.68
ATP1B3P54709 NAP1L4P2-201ENST00000425958 899 ntBASIC4.53□□□□□ -1.68
ATP1B3P54709 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.53□□□□□ -1.68
ATP1B3P54709 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ATP1B3P54709 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ATP1B3P54709 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.53□□□□□ -1.68
ATP1B3P54709 RN7SL814P-201ENST00000487715 300 ntBASIC4.53□□□□□ -1.68
ATP1B3P54709 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.53□□□□□ -1.68
ATP1B3P54709 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.53□□□□□ -1.68
ATP1B3P54709 HMGB1P40-201ENST00000525121 540 ntBASIC4.53□□□□□ -1.68
ATP1B3P54709 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.53□□□□□ -1.68
ATP1B3P54709 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.53□□□□□ -1.68
ATP1B3P54709 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.53□□□□□ -1.68
ATP1B3P54709 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC4.53□□□□□ -1.68
ATP1B3P54709 MIR1273E-201ENST00000581165 102 ntBASIC4.53□□□□□ -1.68
ATP1B3P54709 AC124856.1-201ENST00000600819 896 ntBASIC4.53□□□□□ -1.68
ATP1B3P54709 AL162431.4-201ENST00000604674 411 ntBASIC4.53□□□□□ -1.68
ATP1B3P54709 AC011626.1-201ENST00000604710 562 ntBASIC4.53□□□□□ -1.68
ATP1B3P54709 AC034236.3-201ENST00000605999 461 ntBASIC4.53□□□□□ -1.68
ATP1B3P54709 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.53□□□□□ -1.68
ATP1B3P54709 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
ATP1B3P54709 AC073869.10-201ENST00000642016 354 ntBASIC4.53□□□□□ -1.68
ATP1B3P54709 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
ATP1B3P54709 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
ATP1B3P54709 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
ATP1B3P54709 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
ATP1B3P54709 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.53□□□□□ -1.68
ATP1B3P54709 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
ATP1B3P54709 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
ATP1B3P54709 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
ATP1B3P54709 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.53□□□□□ -1.68
ATP1B3P54709 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ATP1B3P54709 AC011447.7-201ENST00000624228 1590 ntBASIC4.53□□□□□ -1.69
ATP1B3P54709 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
ATP1B3P54709 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.52□□□□□ -1.69
ATP1B3P54709 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
ATP1B3P54709 ZNF652P1-201ENST00000442420 1309 ntBASIC4.52□□□□□ -1.69
ATP1B3P54709 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
ATP1B3P54709 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
ATP1B3P54709 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
ATP1B3P54709 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
ATP1B3P54709 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.52□□□□□ -1.69
ATP1B3P54709 UBBP2-201ENST00000376781 231 ntBASIC4.52□□□□□ -1.69
ATP1B3P54709 MIR589-201ENST00000385238 99 ntBASIC4.52□□□□□ -1.69
ATP1B3P54709 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
ATP1B3P54709 OR8V1P-201ENST00000395193 873 ntBASIC4.52□□□□□ -1.69
ATP1B3P54709 RPL10P10-201ENST00000403509 664 ntBASIC4.52□□□□□ -1.69
ATP1B3P54709 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.52□□□□□ -1.69
ATP1B3P54709 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ATP1B3P54709 AJ239321.1-201ENST00000424255 564 ntBASIC4.52□□□□□ -1.69
ATP1B3P54709 NPM1P26-201ENST00000426339 738 ntBASIC4.52□□□□□ -1.69
ATP1B3P54709 HSPE1P16-201ENST00000426640 348 ntBASIC4.52□□□□□ -1.69
ATP1B3P54709 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.52□□□□□ -1.69
ATP1B3P54709 AC022022.1-201ENST00000430304 178 ntBASIC4.52□□□□□ -1.69
ATP1B3P54709 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.52□□□□□ -1.69
ATP1B3P54709 RPL23AP19-201ENST00000436229 369 ntBASIC4.52□□□□□ -1.69
ATP1B3P54709 BX842559.2-201ENST00000451418 605 ntBASIC4.52□□□□□ -1.69
ATP1B3P54709 CALM1P2-201ENST00000452941 448 ntBASIC4.52□□□□□ -1.69
ATP1B3P54709 AL035090.1-201ENST00000454835 332 ntBASIC4.52□□□□□ -1.69
ATP1B3P54709 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.52□□□□□ -1.69
ATP1B3P54709 AC022826.1-201ENST00000519383 805 ntBASIC4.52□□□□□ -1.69
ATP1B3P54709 BLZF2P-201ENST00000553776 1130 ntBASIC4.52□□□□□ -1.69
ATP1B3P54709 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.52□□□□□ -1.69
ATP1B3P54709 AC022884.2-201ENST00000578535 580 ntBASIC4.52□□□□□ -1.69
ATP1B3P54709 RN7SL708P-201ENST00000580952 299 ntBASIC4.52□□□□□ -1.69
ATP1B3P54709 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.52□□□□□ -1.69
ATP1B3P54709 FO393422.1-201ENST00000603908 708 ntBASIC4.52□□□□□ -1.69
ATP1B3P54709 AC023813.4-201ENST00000607580 580 ntBASIC4.52□□□□□ -1.69
ATP1B3P54709 AC000068.2-201ENST00000608816 460 ntBASIC4.52□□□□□ -1.69
ATP1B3P54709 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
ATP1B3P54709 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
ATP1B3P54709 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ATP1B3P54709 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
ATP1B3P54709 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms