Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
COPB1P53618 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.9□□□□□ -1.46
COPB1P53618 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COPB1P53618 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.9□□□□□ -1.46
COPB1P53618 OR9G4-201ENST00000302957 984 ntBASIC5.9□□□□□ -1.46
COPB1P53618 RNU6-697P-201ENST00000363348 107 ntBASIC5.9□□□□□ -1.46
COPB1P53618 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COPB1P53618 AL512422.1-201ENST00000407033 553 ntBASIC5.9□□□□□ -1.46
COPB1P53618 RPS3AP25-201ENST00000411660 793 ntBASIC5.9□□□□□ -1.46
COPB1P53618 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.9□□□□□ -1.46
COPB1P53618 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.9□□□□□ -1.46
COPB1P53618 AC106883.1-201ENST00000418805 562 ntBASIC5.9□□□□□ -1.46
COPB1P53618 HMGN2P27-201ENST00000427352 270 ntBASIC5.9□□□□□ -1.46
COPB1P53618 AC124944.2-201ENST00000429866 1242 ntBASIC5.9□□□□□ -1.46
COPB1P53618 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.9□□□□□ -1.46
COPB1P53618 RPL23AP19-201ENST00000436229 369 ntBASIC5.9□□□□□ -1.46
COPB1P53618 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.9□□□□□ -1.46
COPB1P53618 ARL5AP3-201ENST00000439327 386 ntBASIC5.9□□□□□ -1.46
COPB1P53618 TPTE2P3-201ENST00000441562 1189 ntBASIC5.9□□□□□ -1.46
COPB1P53618 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.9□□□□□ -1.46
COPB1P53618 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.9□□□□□ -1.46
COPB1P53618 GAPDHP14-201ENST00000450472 937 ntBASIC5.9□□□□□ -1.46
COPB1P53618 LRRC37A14P-201ENST00000452297 462 ntBASIC5.9□□□□□ -1.46
COPB1P53618 AP002345.1-201ENST00000456493 928 ntBASIC5.9□□□□□ -1.46
COPB1P53618 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.9□□□□□ -1.46
COPB1P53618 RPS3AP6-201ENST00000484430 795 ntBASIC5.9□□□□□ -1.46
COPB1P53618 PPIAP19-201ENST00000486414 492 ntBASIC5.9□□□□□ -1.46
COPB1P53618 RN7SL101P-201ENST00000496350 279 ntBASIC5.9□□□□□ -1.46
COPB1P53618 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.9□□□□□ -1.46
COPB1P53618 MTCO3P27-201ENST00000514397 196 ntBASIC5.9□□□□□ -1.46
COPB1P53618 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.46
COPB1P53618 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.9□□□□□ -1.46
COPB1P53618 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC5.9□□□□□ -1.46
COPB1P53618 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
COPB1P53618 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.9□□□□□ -1.46
COPB1P53618 AC106730.2-201ENST00000566641 540 ntBASIC5.9□□□□□ -1.46
COPB1P53618 AC233266.2-201ENST00000567067 528 ntBASIC5.9□□□□□ -1.46
COPB1P53618 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.9□□□□□ -1.46
COPB1P53618 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.9□□□□□ -1.46
COPB1P53618 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.9□□□□□ -1.46
COPB1P53618 RN7SL356P-201ENST00000582228 248 ntBASIC5.9□□□□□ -1.46
COPB1P53618 AC002069.2-201ENST00000603580 883 ntBASIC5.9□□□□□ -1.46
COPB1P53618 HMGB1P51-201ENST00000605166 638 ntBASIC5.9□□□□□ -1.46
COPB1P53618 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC5.9□□□□□ -1.46
COPB1P53618 MIR6768-201ENST00000610734 72 ntBASIC5.9□□□□□ -1.46
COPB1P53618 AC004477.3-201ENST00000614061 590 ntBASIC5.9□□□□□ -1.46
COPB1P53618 AL356752.1-201ENST00000615844 593 ntBASIC5.9□□□□□ -1.46
COPB1P53618 MIR6839-201ENST00000620425 113 ntBASIC5.9□□□□□ -1.46
COPB1P53618 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.9□□□□□ -1.46
COPB1P53618 AC011755.1-201ENST00000623763 2049 ntBASIC5.9□□□□□ -1.47
COPB1P53618 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
COPB1P53618 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.47
COPB1P53618 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
COPB1P53618 AC073136.1-201ENST00000449426 2884 ntBASIC5.9□□□□□ -1.47
COPB1P53618 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.47
COPB1P53618 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
COPB1P53618 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
COPB1P53618 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
COPB1P53618 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.9□□□□□ -1.47
COPB1P53618 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COPB1P53618 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COPB1P53618 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
COPB1P53618 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COPB1P53618 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.89□□□□□ -1.47
COPB1P53618 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COPB1P53618 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COPB1P53618 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.89□□□□□ -1.47
COPB1P53618 RNU1-19P-201ENST00000363306 165 ntBASIC5.89□□□□□ -1.47
COPB1P53618 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COPB1P53618 RNA5SP284-201ENST00000384547 118 ntBASIC5.89□□□□□ -1.47
COPB1P53618 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.89□□□□□ -1.47
COPB1P53618 RPL12P17-201ENST00000432393 498 ntBASIC5.89□□□□□ -1.47
COPB1P53618 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.89□□□□□ -1.47
COPB1P53618 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.89□□□□□ -1.47
COPB1P53618 AC019185.1-201ENST00000442718 389 ntBASIC5.89□□□□□ -1.47
COPB1P53618 AC073109.1-201ENST00000445066 978 ntBASIC5.89□□□□□ -1.47
COPB1P53618 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COPB1P53618 RPL31P20-201ENST00000449593 360 ntBASIC5.89□□□□□ -1.47
COPB1P53618 MTND2P6-201ENST00000455337 1030 ntBASIC5.89□□□□□ -1.47
COPB1P53618 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.89□□□□□ -1.47
COPB1P53618 AL049874.2-201ENST00000492636 288 ntBASIC5.89□□□□□ -1.47
COPB1P53618 RPS24P16-201ENST00000497294 392 ntBASIC5.89□□□□□ -1.47
COPB1P53618 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.89□□□□□ -1.47
COPB1P53618 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.89□□□□□ -1.47
COPB1P53618 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.89□□□□□ -1.47
COPB1P53618 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
COPB1P53618 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.89□□□□□ -1.47
COPB1P53618 OSBPL9P3-201ENST00000534523 595 ntBASIC5.89□□□□□ -1.47
COPB1P53618 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5.89□□□□□ -1.47
COPB1P53618 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
COPB1P53618 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.89□□□□□ -1.47
COPB1P53618 AC092868.3-201ENST00000560515 784 ntBASIC5.89□□□□□ -1.47
COPB1P53618 AL049838.1-201ENST00000563647 981 ntBASIC5.89□□□□□ -1.47
COPB1P53618 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.89□□□□□ -1.47
COPB1P53618 AC006946.3-201ENST00000609791 756 ntBASIC5.89□□□□□ -1.47
COPB1P53618 AC109309.2-201ENST00000612597 332 ntBASIC5.89□□□□□ -1.47
COPB1P53618 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.89□□□□□ -1.47
COPB1P53618 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.89□□□□□ -1.47
COPB1P53618 AL445528.2-201ENST00000620582 470 ntBASIC5.89□□□□□ -1.47
COPB1P53618 AC127024.6-201ENST00000621598 424 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms