Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 GTF3AP5-201ENST00000442645 697 ntBASIC7.12□□□□□ -1.27
USP11P51784 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC7.12□□□□□ -1.27
USP11P51784 AL627224.1-201ENST00000448334 444 ntBASIC7.12□□□□□ -1.27
USP11P51784 AC093166.3-201ENST00000448785 303 ntBASIC7.12□□□□□ -1.27
USP11P51784 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC7.12□□□□□ -1.27
USP11P51784 HIGD1AP16-201ENST00000450986 258 ntBASIC7.12□□□□□ -1.27
USP11P51784 RANP2-201ENST00000456833 229 ntBASIC7.12□□□□□ -1.27
USP11P51784 AC019084.1-201ENST00000457337 432 ntBASIC7.12□□□□□ -1.27
USP11P51784 TPT1P7-201ENST00000458300 517 ntBASIC7.12□□□□□ -1.27
USP11P51784 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
USP11P51784 HMGB1P36-201ENST00000487709 576 ntBASIC7.12□□□□□ -1.27
USP11P51784 SUMO1P1-201ENST00000497904 306 ntBASIC7.12□□□□□ -1.27
USP11P51784 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC7.12□□□□□ -1.27
USP11P51784 NAP1L1P1-201ENST00000524793 1063 ntBASIC7.12□□□□□ -1.27
USP11P51784 AP005639.1-201ENST00000526939 192 ntBASIC7.12□□□□□ -1.27
USP11P51784 AP001317.1-201ENST00000531194 960 ntBASIC7.12□□□□□ -1.27
USP11P51784 NPIPB14P-203ENST00000532298 987 ntBASIC7.12□□□□□ -1.27
USP11P51784 AC024405.1-201ENST00000532521 1042 ntBASIC7.12□□□□□ -1.27
USP11P51784 AP001858.2-201ENST00000536213 601 ntBASIC7.12□□□□□ -1.27
USP11P51784 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC7.12□□□□□ -1.27
USP11P51784 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC7.12□□□□□ -1.27
USP11P51784 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC7.12□□□□□ -1.27
USP11P51784 NPM1P47-201ENST00000560843 856 ntBASIC7.12□□□□□ -1.27
USP11P51784 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC7.12□□□□□ -1.27
USP11P51784 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC7.12□□□□□ -1.27
USP11P51784 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC7.12□□□□□ -1.27
USP11P51784 DYNLL1P1-201ENST00000595442 269 ntBASIC7.12□□□□□ -1.27
USP11P51784 AC011497.2-201ENST00000600255 639 ntBASIC7.12□□□□□ -1.27
USP11P51784 AL137072.1-201ENST00000603444 466 ntBASIC7.12□□□□□ -1.27
USP11P51784 AC096553.1-201ENST00000605169 829 ntBASIC7.12□□□□□ -1.27
USP11P51784 RPSAP75-201ENST00000605848 301 ntBASIC7.12□□□□□ -1.27
USP11P51784 AL080312.2-201ENST00000613001 630 ntBASIC7.12□□□□□ -1.27
USP11P51784 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC7.12□□□□□ -1.27
USP11P51784 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC7.12□□□□□ -1.27
USP11P51784 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC7.12□□□□□ -1.27
USP11P51784 OLMALINC-203ENST00000641087 3779 ntBASIC7.12□□□□□ -1.27
USP11P51784 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.12□□□□□ -1.27
USP11P51784 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
USP11P51784 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
USP11P51784 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
USP11P51784 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
USP11P51784 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
USP11P51784 BX284613.1-201ENST00000452221 1641 ntBASIC7.12□□□□□ -1.27
USP11P51784 AL133243.2-201ENST00000610331 1621 ntBASIC7.12□□□□□ -1.27
USP11P51784 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
USP11P51784 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
USP11P51784 AC011369.2-201ENST00000624423 1567 ntBASIC7.12□□□□□ -1.27
USP11P51784 AL359976.1-201ENST00000418655 3528 ntBASIC7.11□□□□□ -1.27
USP11P51784 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.11□□□□□ -1.27
USP11P51784 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC7.11□□□□□ -1.27
USP11P51784 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC7.11□□□□□ -1.27
USP11P51784 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7.11□□□□□ -1.27
USP11P51784 AC011504.1-201ENST00000623331 4103 ntBASIC7.11□□□□□ -1.27
USP11P51784 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
USP11P51784 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC7.11□□□□□ -1.27
USP11P51784 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC7.11□□□□□ -1.27
USP11P51784 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
USP11P51784 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
USP11P51784 OR11H13P-201ENST00000359695 979 ntBASIC7.11□□□□□ -1.27
USP11P51784 RNU1-49P-201ENST00000363468 159 ntBASIC7.11□□□□□ -1.27
USP11P51784 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC7.11□□□□□ -1.27
USP11P51784 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
USP11P51784 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
USP11P51784 MIR433-201ENST00000384837 93 ntBASIC7.11□□□□□ -1.27
USP11P51784 SNORA40.2-201ENST00000390847 128 ntBASIC7.11□□□□□ -1.27
USP11P51784 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.11□□□□□ -1.27
USP11P51784 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
USP11P51784 RNU6-757P-201ENST00000410334 100 ntBASIC7.11□□□□□ -1.27
USP11P51784 RN7SKP161-201ENST00000411110 305 ntBASIC7.11□□□□□ -1.27
USP11P51784 RNU4-74P-201ENST00000411280 161 ntBASIC7.11□□□□□ -1.27
USP11P51784 RN7SKP108-201ENST00000411367 328 ntBASIC7.11□□□□□ -1.27
USP11P51784 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC7.11□□□□□ -1.27
USP11P51784 PLA2G12AP2-201ENST00000424744 264 ntBASIC7.11□□□□□ -1.27
USP11P51784 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC7.11□□□□□ -1.27
USP11P51784 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
USP11P51784 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC7.11□□□□□ -1.27
USP11P51784 TPMTP4-201ENST00000450749 678 ntBASIC7.11□□□□□ -1.27
USP11P51784 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC7.11□□□□□ -1.27
USP11P51784 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.11□□□□□ -1.27
USP11P51784 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC7.11□□□□□ -1.27
USP11P51784 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC7.11□□□□□ -1.27
USP11P51784 AC022336.1-201ENST00000475510 337 ntBASIC7.11□□□□□ -1.27
USP11P51784 RPL34P33-201ENST00000486062 334 ntBASIC7.11□□□□□ -1.27
USP11P51784 RPL12P30-201ENST00000488389 499 ntBASIC7.11□□□□□ -1.27
USP11P51784 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC7.11□□□□□ -1.27
USP11P51784 AK4P6-201ENST00000505168 528 ntBASIC7.11□□□□□ -1.27
USP11P51784 MTND2P33-201ENST00000506452 1031 ntBASIC7.11□□□□□ -1.27
USP11P51784 KRT19P6-201ENST00000510983 209 ntBASIC7.11□□□□□ -1.27
USP11P51784 RNU6-405P-201ENST00000516637 110 ntBASIC7.11□□□□□ -1.27
USP11P51784 RNA5SP441-201ENST00000516809 88 ntBASIC7.11□□□□□ -1.27
USP11P51784 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7.11□□□□□ -1.27
USP11P51784 AC118273.2-201ENST00000532092 465 ntBASIC7.11□□□□□ -1.27
USP11P51784 AC023310.2-201ENST00000553844 547 ntBASIC7.11□□□□□ -1.27
USP11P51784 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC7.11□□□□□ -1.27
USP11P51784 AC002519.2-203ENST00000567043 837 ntBASIC7.11□□□□□ -1.27
USP11P51784 AC009101.1-201ENST00000568135 242 ntBASIC7.11□□□□□ -1.27
USP11P51784 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.11□□□□□ -1.27
USP11P51784 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC7.11□□□□□ -1.27
USP11P51784 ISCA1P3-201ENST00000577104 373 ntBASIC7.11□□□□□ -1.27
USP11P51784 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms