Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RNF144AP50876 Y_RNA.184-201ENST00000363884 108 ntBASIC6.98□□□□□ -1.29
RNF144AP50876 NFIB-202ENST00000380924 840 ntTSL 5 BASIC6.98□□□□□ -1.29
RNF144AP50876 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RNF144AP50876 SNORA69-201ENST00000383895 132 ntBASIC6.98□□□□□ -1.29
RNF144AP50876 RNU1-39P-201ENST00000383897 165 ntBASIC6.98□□□□□ -1.29
RNF144AP50876 RNU6-98P-201ENST00000384173 107 ntBASIC6.98□□□□□ -1.29
RNF144AP50876 RNU6-185P-201ENST00000384421 107 ntBASIC6.98□□□□□ -1.29
RNF144AP50876 MIR181C-201ENST00000384881 110 ntBASIC6.98□□□□□ -1.29
RNF144AP50876 AC092952.1-201ENST00000397646 1209 ntBASIC6.98□□□□□ -1.29
RNF144AP50876 OR4F7P-201ENST00000402444 931 ntBASIC6.98□□□□□ -1.29
RNF144AP50876 OR4F1P-201ENST00000405102 938 ntBASIC6.98□□□□□ -1.29
RNF144AP50876 U3.31-201ENST00000408113 216 ntBASIC6.98□□□□□ -1.29
RNF144AP50876 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RNF144AP50876 RN7SKP232-201ENST00000410170 290 ntBASIC6.98□□□□□ -1.29
RNF144AP50876 RN7SKP207-201ENST00000411204 303 ntBASIC6.98□□□□□ -1.29
RNF144AP50876 RPL35AP24-201ENST00000413846 330 ntBASIC6.98□□□□□ -1.29
RNF144AP50876 AC245054.2-201ENST00000415639 319 ntBASIC6.98□□□□□ -1.29
RNF144AP50876 OR4F2P-201ENST00000424047 938 ntBASIC6.98□□□□□ -1.29
RNF144AP50876 AC092066.1-201ENST00000425131 317 ntBASIC6.98□□□□□ -1.29
RNF144AP50876 RPL36AP53-201ENST00000432891 316 ntBASIC6.98□□□□□ -1.29
RNF144AP50876 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC6.98□□□□□ -1.29
RNF144AP50876 IFNA20P-201ENST00000436840 528 ntBASIC6.98□□□□□ -1.29
RNF144AP50876 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC6.98□□□□□ -1.29
RNF144AP50876 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC6.98□□□□□ -1.29
RNF144AP50876 RPL17P49-201ENST00000443728 411 ntBASIC6.98□□□□□ -1.29
RNF144AP50876 AC002486.2-201ENST00000447806 590 ntBASIC6.98□□□□□ -1.29
RNF144AP50876 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC6.98□□□□□ -1.29
RNF144AP50876 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC6.98□□□□□ -1.29
RNF144AP50876 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC6.98□□□□□ -1.29
RNF144AP50876 MEMO1P3-201ENST00000459811 302 ntBASIC6.98□□□□□ -1.29
RNF144AP50876 RN7SL19P-201ENST00000462522 306 ntBASIC6.98□□□□□ -1.29
RNF144AP50876 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
RNF144AP50876 RPL17P2-201ENST00000491913 451 ntBASIC6.98□□□□□ -1.29
RNF144AP50876 RN7SL124P-201ENST00000498656 285 ntBASIC6.98□□□□□ -1.29
RNF144AP50876 AC079768.1-201ENST00000503181 711 ntBASIC6.98□□□□□ -1.29
RNF144AP50876 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC6.98□□□□□ -1.29
RNF144AP50876 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
RNF144AP50876 RNA5SP401-201ENST00000515920 127 ntBASIC6.98□□□□□ -1.29
RNF144AP50876 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC6.98□□□□□ -1.29
RNF144AP50876 COX6CP5-201ENST00000527162 228 ntBASIC6.98□□□□□ -1.29
RNF144AP50876 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC6.98□□□□□ -1.29
RNF144AP50876 AP004833.3-201ENST00000531893 322 ntBASIC6.98□□□□□ -1.29
RNF144AP50876 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC6.98□□□□□ -1.29
RNF144AP50876 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC6.98□□□□□ -1.29
RNF144AP50876 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC6.98□□□□□ -1.29
RNF144AP50876 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC6.98□□□□□ -1.29
RNF144AP50876 HYKK-203ENST00000563233 734 ntTSL 2 BASIC6.98□□□□□ -1.29
RNF144AP50876 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC6.98□□□□□ -1.29
RNF144AP50876 RPL35AP25-201ENST00000584631 330 ntBASIC6.98□□□□□ -1.29
RNF144AP50876 TPMTP1-201ENST00000592307 737 ntBASIC6.98□□□□□ -1.29
RNF144AP50876 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.98□□□□□ -1.29
RNF144AP50876 AC113361.1-201ENST00000606683 543 ntBASIC6.98□□□□□ -1.29
RNF144AP50876 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC6.98□□□□□ -1.29
RNF144AP50876 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC6.98□□□□□ -1.29
RNF144AP50876 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC6.98□□□□□ -1.29
RNF144AP50876 AL356585.4-201ENST00000623078 1229 ntBASIC6.98□□□□□ -1.29
RNF144AP50876 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC6.98□□□□□ -1.29
RNF144AP50876 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.98□□□□□ -1.29
RNF144AP50876 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.98□□□□□ -1.29
RNF144AP50876 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.98□□□□□ -1.29
RNF144AP50876 ATM-228ENST00000639240 498 ntTSL 5 BASIC6.98□□□□□ -1.29
RNF144AP50876 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.98□□□□□ -1.29
RNF144AP50876 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RNF144AP50876 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RNF144AP50876 AL137058.3-201ENST00000624531 3099 ntBASIC6.98□□□□□ -1.29
RNF144AP50876 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
RNF144AP50876 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC6.98□□□□□ -1.29
RNF144AP50876 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC6.98□□□□□ -1.29
RNF144AP50876 AC061975.7-201ENST00000592016 2692 ntBASIC6.98□□□□□ -1.29
RNF144AP50876 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
RNF144AP50876 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
RNF144AP50876 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RNF144AP50876 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC6.98□□□□□ -1.29
RNF144AP50876 PSMC1P7-201ENST00000495689 1315 ntBASIC6.98□□□□□ -1.29
RNF144AP50876 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
RNF144AP50876 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RNF144AP50876 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
RNF144AP50876 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC6.97□□□□□ -1.29
RNF144AP50876 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
RNF144AP50876 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
RNF144AP50876 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.97□□□□□ -1.29
RNF144AP50876 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
RNF144AP50876 SLC17A3-203ENST00000361703 1543 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RNF144AP50876 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF144AP50876 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC6.97□□□□□ -1.29
RNF144AP50876 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RNF144AP50876 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF144AP50876 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RNF144AP50876 BX322650.1-201ENST00000332359 2143 ntBASIC6.97□□□□□ -1.29
RNF144AP50876 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF144AP50876 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF144AP50876 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RNF144AP50876 OR11H4-201ENST00000315409 1082 ntBASIC6.97□□□□□ -1.29
RNF144AP50876 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.97□□□□□ -1.29
RNF144AP50876 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF144AP50876 RNU1-122P-201ENST00000365538 156 ntBASIC6.97□□□□□ -1.29
RNF144AP50876 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF144AP50876 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC6.97□□□□□ -1.29
RNF144AP50876 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms