Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
NEDD4P46934 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
NEDD4P46934 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.85□□□□□ -1.47
NEDD4P46934 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.85□□□□□ -1.47
NEDD4P46934 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NEDD4P46934 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.85□□□□□ -1.47
NEDD4P46934 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.85□□□□□ -1.47
NEDD4P46934 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.85□□□□□ -1.47
NEDD4P46934 AL357515.1-201ENST00000402967 542 ntBASIC5.85□□□□□ -1.47
NEDD4P46934 RN7SKP125-201ENST00000410481 302 ntBASIC5.85□□□□□ -1.47
NEDD4P46934 AC104333.2-201ENST00000422630 192 ntBASIC5.85□□□□□ -1.47
NEDD4P46934 AC006455.6-201ENST00000426192 893 ntBASIC5.85□□□□□ -1.47
NEDD4P46934 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.85□□□□□ -1.47
NEDD4P46934 HIGD1AP8-201ENST00000453927 274 ntBASIC5.85□□□□□ -1.47
NEDD4P46934 RN7SL97P-201ENST00000486780 299 ntBASIC5.85□□□□□ -1.47
NEDD4P46934 MORF4L2P1-201ENST00000503761 858 ntBASIC5.85□□□□□ -1.47
NEDD4P46934 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.85□□□□□ -1.47
NEDD4P46934 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.85□□□□□ -1.47
NEDD4P46934 MORF4L1P3-201ENST00000525966 950 ntBASIC5.85□□□□□ -1.47
NEDD4P46934 AC021006.3-201ENST00000530771 192 ntBASIC5.85□□□□□ -1.47
NEDD4P46934 AC008033.2-201ENST00000542626 177 ntBASIC5.85□□□□□ -1.47
NEDD4P46934 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.85□□□□□ -1.47
NEDD4P46934 MIR4646-201ENST00000580775 63 ntBASIC5.85□□□□□ -1.47
NEDD4P46934 AC087783.2-201ENST00000605070 562 ntBASIC5.85□□□□□ -1.47
NEDD4P46934 AC073575.2-201ENST00000614212 627 ntBASIC5.85□□□□□ -1.47
NEDD4P46934 AP003072.5-201ENST00000623872 773 ntBASIC5.85□□□□□ -1.47
NEDD4P46934 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.85□□□□□ -1.47
NEDD4P46934 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
NEDD4P46934 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.85□□□□□ -1.47
NEDD4P46934 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.85□□□□□ -1.47
NEDD4P46934 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
NEDD4P46934 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
NEDD4P46934 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NEDD4P46934 AL022393.1-201ENST00000625142 1677 ntBASIC5.85□□□□□ -1.47
NEDD4P46934 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NEDD4P46934 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
NEDD4P46934 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.84□□□□□ -1.47
NEDD4P46934 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NEDD4P46934 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.84□□□□□ -1.47
NEDD4P46934 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
NEDD4P46934 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NEDD4P46934 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NEDD4P46934 SNORA73.1-201ENST00000363107 205 ntBASIC5.84□□□□□ -1.47
NEDD4P46934 SNORA11B-201ENST00000408175 129 ntBASIC5.84□□□□□ -1.47
NEDD4P46934 GTF2IP5-201ENST00000414608 731 ntBASIC5.84□□□□□ -1.47
NEDD4P46934 PCNPP4-201ENST00000414817 517 ntBASIC5.84□□□□□ -1.47
NEDD4P46934 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.84□□□□□ -1.47
NEDD4P46934 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.84□□□□□ -1.47
NEDD4P46934 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.84□□□□□ -1.47
NEDD4P46934 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.84□□□□□ -1.47
NEDD4P46934 SUMO2P1-206ENST00000445436 284 ntBASIC5.84□□□□□ -1.47
NEDD4P46934 RPL35AP28-201ENST00000459730 331 ntBASIC5.84□□□□□ -1.47
NEDD4P46934 OR2A3P-201ENST00000493774 953 ntBASIC5.84□□□□□ -1.47
NEDD4P46934 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.84□□□□□ -1.47
NEDD4P46934 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NEDD4P46934 AC026688.1-201ENST00000520639 1168 ntBASIC5.84□□□□□ -1.47
NEDD4P46934 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.84□□□□□ -1.47
NEDD4P46934 AP000676.2-201ENST00000529711 301 ntBASIC5.84□□□□□ -1.47
NEDD4P46934 AC005000.1-201ENST00000536192 288 ntBASIC5.84□□□□□ -1.47
NEDD4P46934 AC006349.1-201ENST00000555526 235 ntBASIC5.84□□□□□ -1.47
NEDD4P46934 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC5.84□□□□□ -1.47
NEDD4P46934 AC104687.2-201ENST00000604442 342 ntBASIC5.84□□□□□ -1.47
NEDD4P46934 AL022401.1-201ENST00000619498 108 ntBASIC5.84□□□□□ -1.47
NEDD4P46934 BX005214.3-202ENST00000619809 325 ntBASIC5.84□□□□□ -1.47
NEDD4P46934 AL445528.2-201ENST00000620582 470 ntBASIC5.84□□□□□ -1.47
NEDD4P46934 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.84□□□□□ -1.47
NEDD4P46934 AL672167.1-204ENST00000641875 3017 ntBASIC5.84□□□□□ -1.47
NEDD4P46934 AC112255.1-201ENST00000624070 2493 ntBASIC5.84□□□□□ -1.47
NEDD4P46934 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
NEDD4P46934 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
NEDD4P46934 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
NEDD4P46934 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.48
NEDD4P46934 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
NEDD4P46934 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
NEDD4P46934 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NEDD4P46934 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NEDD4P46934 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
NEDD4P46934 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NEDD4P46934 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NEDD4P46934 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NEDD4P46934 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
NEDD4P46934 CTSL3P-202ENST00000412179 788 ntBASIC5.83□□□□□ -1.48
NEDD4P46934 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.83□□□□□ -1.48
NEDD4P46934 TBCAP2-201ENST00000416175 326 ntBASIC5.83□□□□□ -1.48
NEDD4P46934 QRSL1P2-201ENST00000418582 964 ntBASIC5.83□□□□□ -1.48
NEDD4P46934 MGAT2P2-201ENST00000427194 797 ntBASIC5.83□□□□□ -1.48
NEDD4P46934 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NEDD4P46934 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.83□□□□□ -1.48
NEDD4P46934 AL136455.1-201ENST00000441083 1240 ntBASIC5.83□□□□□ -1.48
NEDD4P46934 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.83□□□□□ -1.48
NEDD4P46934 AC112498.1-201ENST00000444401 332 ntBASIC5.83□□□□□ -1.48
NEDD4P46934 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.83□□□□□ -1.48
NEDD4P46934 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
NEDD4P46934 NDUFB5P1-201ENST00000508134 564 ntBASIC5.83□□□□□ -1.48
NEDD4P46934 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.83□□□□□ -1.48
NEDD4P46934 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.83□□□□□ -1.48
NEDD4P46934 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NEDD4P46934 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.83□□□□□ -1.48
NEDD4P46934 AGGF1P9-201ENST00000561884 913 ntBASIC5.83□□□□□ -1.48
NEDD4P46934 AL353662.3-201ENST00000625131 237 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms