Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.21□□□□□ -1.58
TRIM23P36406 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
TRIM23P36406 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
TRIM23P36406 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.21□□□□□ -1.58
TRIM23P36406 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM23P36406 RBPJP2-201ENST00000618187 1444 ntBASIC5.21□□□□□ -1.58
TRIM23P36406 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.21□□□□□ -1.58
TRIM23P36406 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
TRIM23P36406 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM23P36406 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM23P36406 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM23P36406 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
TRIM23P36406 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM23P36406 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM23P36406 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM23P36406 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM23P36406 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM23P36406 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.2□□□□□ -1.58
TRIM23P36406 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
TRIM23P36406 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM23P36406 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM23P36406 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM23P36406 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM23P36406 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
TRIM23P36406 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
TRIM23P36406 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.2□□□□□ -1.58
TRIM23P36406 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM23P36406 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
TRIM23P36406 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.2□□□□□ -1.58
TRIM23P36406 SNORA11B-201ENST00000408175 129 ntBASIC5.2□□□□□ -1.58
TRIM23P36406 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TRIM23P36406 RAB9AP4-201ENST00000415230 609 ntBASIC5.2□□□□□ -1.58
TRIM23P36406 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM23P36406 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.2□□□□□ -1.58
TRIM23P36406 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM23P36406 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM23P36406 AC016772.1-201ENST00000444170 1261 ntBASIC5.2□□□□□ -1.58
TRIM23P36406 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM23P36406 FCF1P7-201ENST00000451185 558 ntBASIC5.2□□□□□ -1.58
TRIM23P36406 RPL21P6-201ENST00000479171 504 ntBASIC5.2□□□□□ -1.58
TRIM23P36406 RPL32P9-201ENST00000487963 407 ntBASIC5.2□□□□□ -1.58
TRIM23P36406 HMGB3P14-201ENST00000494195 599 ntBASIC5.2□□□□□ -1.58
TRIM23P36406 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.2□□□□□ -1.58
TRIM23P36406 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.2□□□□□ -1.58
TRIM23P36406 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM23P36406 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM23P36406 HMGN1P9-201ENST00000515212 298 ntBASIC5.2□□□□□ -1.58
TRIM23P36406 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.2□□□□□ -1.58
TRIM23P36406 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM23P36406 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM23P36406 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.2□□□□□ -1.58
TRIM23P36406 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM23P36406 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
TRIM23P36406 AC087763.1-201ENST00000603391 286 ntBASIC5.2□□□□□ -1.58
TRIM23P36406 AC108738.1-201ENST00000603703 237 ntBASIC5.2□□□□□ -1.58
TRIM23P36406 AC009597.2-201ENST00000604659 592 ntBASIC5.2□□□□□ -1.58
TRIM23P36406 AL445222.1-201ENST00000607259 628 ntBASIC5.2□□□□□ -1.58
TRIM23P36406 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM23P36406 AC009163.6-201ENST00000612367 342 ntBASIC5.2□□□□□ -1.58
TRIM23P36406 AC243960.7-201ENST00000623532 707 ntBASIC5.2□□□□□ -1.58
TRIM23P36406 AC135068.12-201ENST00000637370 931 ntBASIC5.2□□□□□ -1.58
TRIM23P36406 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM23P36406 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
TRIM23P36406 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM23P36406 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
TRIM23P36406 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
TRIM23P36406 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
TRIM23P36406 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM23P36406 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM23P36406 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM23P36406 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM23P36406 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
TRIM23P36406 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
TRIM23P36406 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TRIM23P36406 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM23P36406 AL606537.1-201ENST00000607258 2011 ntBASIC5.19□□□□□ -1.58
TRIM23P36406 HSPA8P18-201ENST00000439846 1928 ntBASIC5.19□□□□□ -1.58
TRIM23P36406 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM23P36406 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM23P36406 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM23P36406 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM23P36406 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM23P36406 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM23P36406 SNORA74A-201ENST00000364089 198 ntBASIC5.19□□□□□ -1.58
TRIM23P36406 SNORA70.6-201ENST00000383934 134 ntBASIC5.19□□□□□ -1.58
TRIM23P36406 MIR600-201ENST00000385007 98 ntBASIC5.19□□□□□ -1.58
TRIM23P36406 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.19□□□□□ -1.58
TRIM23P36406 OR8V1P-201ENST00000395193 873 ntBASIC5.19□□□□□ -1.58
TRIM23P36406 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.19□□□□□ -1.58
TRIM23P36406 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM23P36406 AC211486.3-201ENST00000412694 621 ntBASIC5.19□□□□□ -1.58
TRIM23P36406 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.19□□□□□ -1.58
TRIM23P36406 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM23P36406 PTP4A1P1-201ENST00000420539 515 ntBASIC5.19□□□□□ -1.58
TRIM23P36406 EI24P4-201ENST00000423683 1078 ntBASIC5.19□□□□□ -1.58
TRIM23P36406 UBE2V2P3-201ENST00000433562 437 ntBASIC5.19□□□□□ -1.58
TRIM23P36406 AC092447.2-201ENST00000435487 669 ntBASIC5.19□□□□□ -1.58
TRIM23P36406 CEACAMP7-201ENST00000444105 496 ntBASIC5.19□□□□□ -1.58
TRIM23P36406 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM23P36406 OR6C72P-201ENST00000451403 892 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms