Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPA3P35244 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPA3P35244 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.04□□□□□ -1.6
RPA3P35244 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RPA3P35244 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPA3P35244 CIR1P2-201ENST00000514821 1342 ntBASIC5.04□□□□□ -1.6
RPA3P35244 PANDAR-201ENST00000629595 1506 ntBASIC5.04□□□□□ -1.6
RPA3P35244 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.04□□□□□ -1.6
RPA3P35244 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPA3P35244 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPA3P35244 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPA3P35244 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RPA3P35244 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RPA3P35244 DUTP5-201ENST00000406790 469 ntBASIC5.04□□□□□ -1.6
RPA3P35244 RN7SKP126-201ENST00000411143 300 ntBASIC5.04□□□□□ -1.6
RPA3P35244 QRSL1P2-201ENST00000418582 964 ntBASIC5.04□□□□□ -1.6
RPA3P35244 EI24P4-201ENST00000423683 1078 ntBASIC5.04□□□□□ -1.6
RPA3P35244 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.04□□□□□ -1.6
RPA3P35244 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.04□□□□□ -1.6
RPA3P35244 AC245047.2-201ENST00000441060 530 ntBASIC5.04□□□□□ -1.6
RPA3P35244 AURKAPS1-201ENST00000451805 1212 ntBASIC5.04□□□□□ -1.6
RPA3P35244 AL691482.1-201ENST00000453255 87 ntBASIC5.04□□□□□ -1.6
RPA3P35244 AC009127.1-201ENST00000467090 155 ntBASIC5.04□□□□□ -1.6
RPA3P35244 AC074386.1-201ENST00000476560 767 ntBASIC5.04□□□□□ -1.6
RPA3P35244 RN7SL629P-201ENST00000489622 285 ntBASIC5.04□□□□□ -1.6
RPA3P35244 AC020890.1-201ENST00000491837 504 ntBASIC5.04□□□□□ -1.6
RPA3P35244 AC072052.1-201ENST00000496556 306 ntBASIC5.04□□□□□ -1.6
RPA3P35244 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.04□□□□□ -1.6
RPA3P35244 GOLGA5P1-201ENST00000507317 980 ntBASIC5.04□□□□□ -1.6
RPA3P35244 RNU6-1334P-201ENST00000516032 105 ntBASIC5.04□□□□□ -1.6
RPA3P35244 RNA5SP464-201ENST00000516251 108 ntBASIC5.04□□□□□ -1.6
RPA3P35244 SCARNA21.2-201ENST00000516600 166 ntBASIC5.04□□□□□ -1.6
RPA3P35244 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.04□□□□□ -1.6
RPA3P35244 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
RPA3P35244 EIF4A2P5-201ENST00000529914 499 ntBASIC5.04□□□□□ -1.6
RPA3P35244 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.04□□□□□ -1.6
RPA3P35244 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.04□□□□□ -1.6
RPA3P35244 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RPA3P35244 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.04□□□□□ -1.6
RPA3P35244 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.04□□□□□ -1.6
RPA3P35244 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.04□□□□□ -1.6
RPA3P35244 AC095055.1-201ENST00000603472 1113 ntBASIC5.04□□□□□ -1.6
RPA3P35244 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RPA3P35244 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RPA3P35244 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.04□□□□□ -1.6
RPA3P35244 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPA3P35244 ZNF733P-202ENST00000444809 1573 ntBASIC5.04□□□□□ -1.6
RPA3P35244 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RPA3P35244 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPA3P35244 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPA3P35244 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPA3P35244 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.03□□□□□ -1.6
RPA3P35244 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPA3P35244 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.03□□□□□ -1.6
RPA3P35244 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RPA3P35244 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPA3P35244 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RPA3P35244 SNORA17.1-201ENST00000362945 126 ntBASIC5.03□□□□□ -1.6
RPA3P35244 U3.2-201ENST00000362981 210 ntBASIC5.03□□□□□ -1.6
RPA3P35244 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.03□□□□□ -1.6
RPA3P35244 RNU6-171P-201ENST00000384354 107 ntBASIC5.03□□□□□ -1.6
RPA3P35244 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.03□□□□□ -1.6
RPA3P35244 RN7SKP125-201ENST00000410481 302 ntBASIC5.03□□□□□ -1.6
RPA3P35244 CKS1BP6-201ENST00000424932 240 ntBASIC5.03□□□□□ -1.6
RPA3P35244 HSPE1P16-201ENST00000426640 348 ntBASIC5.03□□□□□ -1.6
RPA3P35244 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.03□□□□□ -1.6
RPA3P35244 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.03□□□□□ -1.6
RPA3P35244 AL450023.3-201ENST00000440592 271 ntBASIC5.03□□□□□ -1.6
RPA3P35244 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.03□□□□□ -1.6
RPA3P35244 RHEBP2-201ENST00000450289 600 ntBASIC5.03□□□□□ -1.6
RPA3P35244 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.03□□□□□ -1.6
RPA3P35244 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPA3P35244 AL445433.1-201ENST00000457507 257 ntBASIC5.03□□□□□ -1.6
RPA3P35244 CYCSP34-201ENST00000458172 304 ntBASIC5.03□□□□□ -1.6
RPA3P35244 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.03□□□□□ -1.6
RPA3P35244 RPS18P6-201ENST00000476880 458 ntBASIC5.03□□□□□ -1.6
RPA3P35244 AC079841.1-201ENST00000481228 950 ntBASIC5.03□□□□□ -1.6
RPA3P35244 AC073358.1-201ENST00000505671 684 ntBASIC5.03□□□□□ -1.6
RPA3P35244 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.03□□□□□ -1.6
RPA3P35244 AC090022.1-201ENST00000546569 311 ntBASIC5.03□□□□□ -1.6
RPA3P35244 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.03□□□□□ -1.6
RPA3P35244 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.03□□□□□ -1.6
RPA3P35244 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.03□□□□□ -1.6
RPA3P35244 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.03□□□□□ -1.6
RPA3P35244 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.03□□□□□ -1.6
RPA3P35244 AP000550.3-201ENST00000637734 379 ntBASIC5.03□□□□□ -1.6
RPA3P35244 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.03□□□□□ -1.6
RPA3P35244 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RPA3P35244 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.03□□□□□ -1.6
RPA3P35244 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPA3P35244 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.02□□□□□ -1.61
RPA3P35244 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RPA3P35244 AC235565.1-201ENST00000456962 1325 ntBASIC5.02□□□□□ -1.61
RPA3P35244 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.02□□□□□ -1.61
RPA3P35244 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.02□□□□□ -1.61
RPA3P35244 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RPA3P35244 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RPA3P35244 GNG5P5-201ENST00000420444 220 ntBASIC5.02□□□□□ -1.61
RPA3P35244 RPS4XP16-201ENST00000427198 791 ntBASIC5.02□□□□□ -1.61
RPA3P35244 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms