Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.96□□□□□ -1.46
CIITAP33076 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.96□□□□□ -1.46
CIITAP33076 HSPD1P12-201ENST00000429127 1069 ntBASIC5.96□□□□□ -1.46
CIITAP33076 AL627308.1-201ENST00000435693 821 ntBASIC5.96□□□□□ -1.46
CIITAP33076 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.96□□□□□ -1.46
CIITAP33076 NPM1P19-201ENST00000450070 712 ntBASIC5.96□□□□□ -1.46
CIITAP33076 BX284632.1-201ENST00000478218 541 ntBASIC5.96□□□□□ -1.46
CIITAP33076 RPL7P41-201ENST00000485823 957 ntBASIC5.96□□□□□ -1.46
CIITAP33076 AC008638.1-201ENST00000506035 866 ntBASIC5.96□□□□□ -1.46
CIITAP33076 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.96□□□□□ -1.46
CIITAP33076 IMPA1P1-201ENST00000510718 842 ntBASIC5.96□□□□□ -1.46
CIITAP33076 AC021193.1-201ENST00000511607 420 ntBASIC5.96□□□□□ -1.46
CIITAP33076 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.96□□□□□ -1.46
CIITAP33076 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.96□□□□□ -1.46
CIITAP33076 RNU6-760P-201ENST00000516078 97 ntBASIC5.96□□□□□ -1.46
CIITAP33076 AP003102.1-201ENST00000525638 661 ntBASIC5.96□□□□□ -1.46
CIITAP33076 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.96□□□□□ -1.46
CIITAP33076 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CIITAP33076 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CIITAP33076 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.96□□□□□ -1.46
CIITAP33076 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.96□□□□□ -1.46
CIITAP33076 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.96□□□□□ -1.46
CIITAP33076 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.96□□□□□ -1.46
CIITAP33076 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CIITAP33076 AC016769.4-201ENST00000616893 535 ntBASIC5.96□□□□□ -1.46
CIITAP33076 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
CIITAP33076 AC109446.4-201ENST00000623235 2755 ntBASIC5.96□□□□□ -1.46
CIITAP33076 AC093671.1-201ENST00000624981 2929 ntBASIC5.96□□□□□ -1.46
CIITAP33076 PROS2P-201ENST00000474651 1951 ntBASIC5.96□□□□□ -1.46
CIITAP33076 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.96□□□□□ -1.46
CIITAP33076 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CIITAP33076 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.46
CIITAP33076 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CIITAP33076 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
CIITAP33076 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
CIITAP33076 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CIITAP33076 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CIITAP33076 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CIITAP33076 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CIITAP33076 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
CIITAP33076 AL592494.2-201ENST00000425455 1548 ntBASIC5.95□□□□□ -1.46
CIITAP33076 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
CIITAP33076 RN7SKP153-201ENST00000365026 316 ntBASIC5.95□□□□□ -1.46
CIITAP33076 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CIITAP33076 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.95□□□□□ -1.46
CIITAP33076 NPM1P37-201ENST00000403105 874 ntBASIC5.95□□□□□ -1.46
CIITAP33076 MIR1182-201ENST00000408363 97 ntBASIC5.95□□□□□ -1.46
CIITAP33076 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.95□□□□□ -1.46
CIITAP33076 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.95□□□□□ -1.46
CIITAP33076 CLUHP1-201ENST00000435012 1190 ntBASIC5.95□□□□□ -1.46
CIITAP33076 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
CIITAP33076 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.95□□□□□ -1.46
CIITAP33076 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.95□□□□□ -1.46
CIITAP33076 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.95□□□□□ -1.46
CIITAP33076 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CIITAP33076 RN7SL814P-201ENST00000487715 300 ntBASIC5.95□□□□□ -1.46
CIITAP33076 AC022133.1-201ENST00000490961 571 ntBASIC5.95□□□□□ -1.46
CIITAP33076 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CIITAP33076 AC097486.1-201ENST00000515331 210 ntBASIC5.95□□□□□ -1.46
CIITAP33076 RNU6-415P-201ENST00000516252 97 ntBASIC5.95□□□□□ -1.46
CIITAP33076 AC012400.1-201ENST00000518452 381 ntBASIC5.95□□□□□ -1.46
CIITAP33076 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
CIITAP33076 IGLV2-28-201ENST00000520681 304 ntBASIC5.95□□□□□ -1.46
CIITAP33076 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.95□□□□□ -1.46
CIITAP33076 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.95□□□□□ -1.46
CIITAP33076 OR11J2P-201ENST00000555298 907 ntBASIC5.95□□□□□ -1.46
CIITAP33076 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.95□□□□□ -1.46
CIITAP33076 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.95□□□□□ -1.46
CIITAP33076 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
CIITAP33076 FAM60CP-201ENST00000591086 664 ntBASIC5.95□□□□□ -1.46
CIITAP33076 AC011626.1-201ENST00000604710 562 ntBASIC5.95□□□□□ -1.46
CIITAP33076 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.95□□□□□ -1.46
CIITAP33076 AL139407.1-201ENST00000613826 1175 ntBASIC5.95□□□□□ -1.46
CIITAP33076 OR8G7P-201ENST00000616658 848 ntBASIC5.95□□□□□ -1.46
CIITAP33076 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.95□□□□□ -1.46
CIITAP33076 AP002505.2-201ENST00000623585 696 ntBASIC5.95□□□□□ -1.46
CIITAP33076 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.95□□□□□ -1.46
CIITAP33076 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
CIITAP33076 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
CIITAP33076 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
CIITAP33076 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.95□□□□□ -1.46
CIITAP33076 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
CIITAP33076 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
CIITAP33076 AC006210.2-201ENST00000367074 1545 ntBASIC5.94□□□□□ -1.46
CIITAP33076 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CIITAP33076 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.94□□□□□ -1.46
CIITAP33076 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.94□□□□□ -1.46
CIITAP33076 C4BPAP1-201ENST00000415474 1893 ntBASIC5.94□□□□□ -1.46
CIITAP33076 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CIITAP33076 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.94□□□□□ -1.46
CIITAP33076 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CIITAP33076 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.94□□□□□ -1.46
CIITAP33076 MIR365B-201ENST00000362317 111 ntBASIC5.94□□□□□ -1.46
CIITAP33076 RNA5SP90-201ENST00000364801 99 ntBASIC5.94□□□□□ -1.46
CIITAP33076 MIR589-201ENST00000385238 99 ntBASIC5.94□□□□□ -1.46
CIITAP33076 AL355143.1-201ENST00000407101 841 ntBASIC5.94□□□□□ -1.46
CIITAP33076 RNU4-34P-201ENST00000410431 124 ntBASIC5.94□□□□□ -1.46
CIITAP33076 RNU2-22P-201ENST00000411266 212 ntBASIC5.94□□□□□ -1.46
CIITAP33076 GPS2P1-201ENST00000411761 986 ntBASIC5.94□□□□□ -1.46
CIITAP33076 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms