Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AC079841.1-201ENST00000481228 950 ntBASIC5.47□□□□□ -1.53
CHRNA3P32297 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.47□□□□□ -1.53
CHRNA3P32297 AC072052.1-201ENST00000496556 306 ntBASIC5.47□□□□□ -1.53
CHRNA3P32297 AC006499.3-201ENST00000506077 748 ntBASIC5.47□□□□□ -1.53
CHRNA3P32297 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.47□□□□□ -1.53
CHRNA3P32297 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.47□□□□□ -1.53
CHRNA3P32297 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CHRNA3P32297 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CHRNA3P32297 AC018695.5-201ENST00000605872 315 ntBASIC5.47□□□□□ -1.53
CHRNA3P32297 MIR6719-201ENST00000622428 87 ntBASIC5.47□□□□□ -1.53
CHRNA3P32297 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.47□□□□□ -1.53
CHRNA3P32297 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.47□□□□□ -1.53
CHRNA3P32297 OR52B5P-202ENST00000641118 1110 ntBASIC5.47□□□□□ -1.53
CHRNA3P32297 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.47□□□□□ -1.53
CHRNA3P32297 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
CHRNA3P32297 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CHRNA3P32297 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CHRNA3P32297 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CHRNA3P32297 AC007996.1-201ENST00000620414 2821 ntBASIC5.47□□□□□ -1.53
CHRNA3P32297 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CHRNA3P32297 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CHRNA3P32297 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CHRNA3P32297 Z95331.1-201ENST00000623075 23112 ntBASIC5.46□□□□□ -1.54
CHRNA3P32297 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
CHRNA3P32297 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CHRNA3P32297 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CHRNA3P32297 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.46□□□□□ -1.54
CHRNA3P32297 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.46□□□□□ -1.54
CHRNA3P32297 SNORA67-201ENST00000384423 137 ntBASIC5.46□□□□□ -1.54
CHRNA3P32297 HSPA8P15-201ENST00000401676 786 ntBASIC5.46□□□□□ -1.54
CHRNA3P32297 RPL10P10-201ENST00000403509 664 ntBASIC5.46□□□□□ -1.54
CHRNA3P32297 SNORA11B-201ENST00000408175 129 ntBASIC5.46□□□□□ -1.54
CHRNA3P32297 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.46□□□□□ -1.54
CHRNA3P32297 AL139148.1-201ENST00000427122 680 ntBASIC5.46□□□□□ -1.54
CHRNA3P32297 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.46□□□□□ -1.54
CHRNA3P32297 AL161722.2-201ENST00000434731 981 ntBASIC5.46□□□□□ -1.54
CHRNA3P32297 CLUHP1-201ENST00000435012 1190 ntBASIC5.46□□□□□ -1.54
CHRNA3P32297 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.46□□□□□ -1.54
CHRNA3P32297 RN7SL727P-201ENST00000482164 296 ntBASIC5.46□□□□□ -1.54
CHRNA3P32297 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.46□□□□□ -1.54
CHRNA3P32297 RNU6-941P-201ENST00000516346 108 ntBASIC5.46□□□□□ -1.54
CHRNA3P32297 OR10G5P-201ENST00000532733 358 ntBASIC5.46□□□□□ -1.54
CHRNA3P32297 YWHABP2-201ENST00000540201 713 ntBASIC5.46□□□□□ -1.54
CHRNA3P32297 RPL10P14-201ENST00000565265 298 ntBASIC5.46□□□□□ -1.54
CHRNA3P32297 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.46□□□□□ -1.54
CHRNA3P32297 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.46□□□□□ -1.54
CHRNA3P32297 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.46□□□□□ -1.54
CHRNA3P32297 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.46□□□□□ -1.54
CHRNA3P32297 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.46□□□□□ -1.54
CHRNA3P32297 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CHRNA3P32297 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CHRNA3P32297 AC025574.1-201ENST00000554784 1653 ntBASIC5.46□□□□□ -1.54
CHRNA3P32297 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.46□□□□□ -1.54
CHRNA3P32297 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CHRNA3P32297 AC000374.1-201ENST00000434698 1745 ntBASIC5.45□□□□□ -1.54
CHRNA3P32297 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.45□□□□□ -1.54
CHRNA3P32297 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CHRNA3P32297 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CHRNA3P32297 MIR105-2-201ENST00000385083 81 ntBASIC5.45□□□□□ -1.54
CHRNA3P32297 RNU6-1320P-201ENST00000390838 107 ntBASIC5.45□□□□□ -1.54
CHRNA3P32297 RNU1-149P-201ENST00000390870 161 ntBASIC5.45□□□□□ -1.54
CHRNA3P32297 RNU6-1269P-201ENST00000391139 107 ntBASIC5.45□□□□□ -1.54
CHRNA3P32297 OR4K12P-201ENST00000406538 961 ntBASIC5.45□□□□□ -1.54
CHRNA3P32297 RNA5SP487-201ENST00000410186 122 ntBASIC5.45□□□□□ -1.54
CHRNA3P32297 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.45□□□□□ -1.54
CHRNA3P32297 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CHRNA3P32297 AC108075.1-201ENST00000424692 529 ntBASIC5.45□□□□□ -1.54
CHRNA3P32297 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.45□□□□□ -1.54
CHRNA3P32297 AC245047.2-201ENST00000441060 530 ntBASIC5.45□□□□□ -1.54
CHRNA3P32297 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.45□□□□□ -1.54
CHRNA3P32297 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.45□□□□□ -1.54
CHRNA3P32297 RNU6-599P-201ENST00000459383 107 ntBASIC5.45□□□□□ -1.54
CHRNA3P32297 RNU6-1193P-201ENST00000459461 107 ntBASIC5.45□□□□□ -1.54
CHRNA3P32297 AC006427.1-201ENST00000514359 712 ntBASIC5.45□□□□□ -1.54
CHRNA3P32297 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.45□□□□□ -1.54
CHRNA3P32297 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC5.45□□□□□ -1.54
CHRNA3P32297 AL358913.1-201ENST00000554342 121 ntBASIC5.45□□□□□ -1.54
CHRNA3P32297 AC051619.2-201ENST00000559063 397 ntBASIC5.45□□□□□ -1.54
CHRNA3P32297 SNORD39.2-201ENST00000579995 76 ntBASIC5.45□□□□□ -1.54
CHRNA3P32297 MIR4472-2-201ENST00000582069 67 ntBASIC5.45□□□□□ -1.54
CHRNA3P32297 AC011840.5-201ENST00000582125 771 ntBASIC5.45□□□□□ -1.54
CHRNA3P32297 AC010487.1-201ENST00000594408 1172 ntBASIC5.45□□□□□ -1.54
CHRNA3P32297 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.45□□□□□ -1.54
CHRNA3P32297 OR7M1P-201ENST00000608946 533 ntBASIC5.45□□□□□ -1.54
CHRNA3P32297 AC016769.4-201ENST00000616893 535 ntBASIC5.45□□□□□ -1.54
CHRNA3P32297 RNU6-368P-201ENST00000620928 107 ntBASIC5.45□□□□□ -1.54
CHRNA3P32297 AC074140.1-201ENST00000621617 208 ntBASIC5.45□□□□□ -1.54
CHRNA3P32297 RNU6-538P-201ENST00000622329 107 ntBASIC5.45□□□□□ -1.54
CHRNA3P32297 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.45□□□□□ -1.54
CHRNA3P32297 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.45□□□□□ -1.54
CHRNA3P32297 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CHRNA3P32297 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.45□□□□□ -1.54
CHRNA3P32297 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CHRNA3P32297 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CHRNA3P32297 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.44□□□□□ -1.54
CHRNA3P32297 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CHRNA3P32297 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
CHRNA3P32297 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.44□□□□□ -1.54
CHRNA3P32297 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CHRNA3P32297 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms