Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.36□□□□□ -1.39
SMARCA1P28370 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.36□□□□□ -1.39
SMARCA1P28370 METTL8-218ENST00000638989 876 ntTSL 5 BASIC6.36□□□□□ -1.39
SMARCA1P28370 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.36□□□□□ -1.39
SMARCA1P28370 METTL8-219ENST00000640734 726 ntTSL 2 BASIC6.36□□□□□ -1.39
SMARCA1P28370 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SMARCA1P28370 AC006484.1-201ENST00000435086 1884 ntBASIC6.36□□□□□ -1.39
SMARCA1P28370 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SMARCA1P28370 AL359955.1-201ENST00000455242 3275 ntBASIC6.36□□□□□ -1.39
SMARCA1P28370 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
SMARCA1P28370 AC015799.1-201ENST00000622996 3122 ntBASIC6.36□□□□□ -1.39
SMARCA1P28370 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SMARCA1P28370 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.36□□□□□ -1.39
SMARCA1P28370 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
SMARCA1P28370 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
SMARCA1P28370 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SMARCA1P28370 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.35□□□□□ -1.39
SMARCA1P28370 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.35□□□□□ -1.39
SMARCA1P28370 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SMARCA1P28370 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SMARCA1P28370 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SMARCA1P28370 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SMARCA1P28370 RNA5SP183-201ENST00000362452 119 ntBASIC6.35□□□□□ -1.39
SMARCA1P28370 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SMARCA1P28370 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.35□□□□□ -1.39
SMARCA1P28370 BX664727.1-201ENST00000416024 466 ntBASIC6.35□□□□□ -1.39
SMARCA1P28370 AL158827.1-201ENST00000416300 391 ntBASIC6.35□□□□□ -1.39
SMARCA1P28370 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC6.35□□□□□ -1.39
SMARCA1P28370 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.35□□□□□ -1.39
SMARCA1P28370 AC079355.1-201ENST00000421770 223 ntBASIC6.35□□□□□ -1.39
SMARCA1P28370 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC6.35□□□□□ -1.39
SMARCA1P28370 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC6.35□□□□□ -1.39
SMARCA1P28370 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC6.35□□□□□ -1.39
SMARCA1P28370 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.35□□□□□ -1.39
SMARCA1P28370 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.35□□□□□ -1.39
SMARCA1P28370 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.35□□□□□ -1.39
SMARCA1P28370 MTCYBP21-201ENST00000443300 1113 ntBASIC6.35□□□□□ -1.39
SMARCA1P28370 RPL23AP23-201ENST00000452590 471 ntBASIC6.35□□□□□ -1.39
SMARCA1P28370 RPL7P45-201ENST00000455851 743 ntBASIC6.35□□□□□ -1.39
SMARCA1P28370 snoU109.3-201ENST00000459477 145 ntBASIC6.35□□□□□ -1.39
SMARCA1P28370 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.35□□□□□ -1.39
SMARCA1P28370 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.35□□□□□ -1.39
SMARCA1P28370 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.35□□□□□ -1.39
SMARCA1P28370 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC6.35□□□□□ -1.39
SMARCA1P28370 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.35□□□□□ -1.39
SMARCA1P28370 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.35□□□□□ -1.39
SMARCA1P28370 AP002884.5-201ENST00000595053 1132 ntBASIC6.35□□□□□ -1.39
SMARCA1P28370 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC6.35□□□□□ -1.39
SMARCA1P28370 BMS1P7-201ENST00000602440 1052 ntBASIC6.35□□□□□ -1.39
SMARCA1P28370 AC079880.2-201ENST00000603790 1213 ntBASIC6.35□□□□□ -1.39
SMARCA1P28370 AC069431.2-201ENST00000604149 1099 ntBASIC6.35□□□□□ -1.39
SMARCA1P28370 SUGT1P3-202ENST00000604259 383 ntBASIC6.35□□□□□ -1.39
SMARCA1P28370 AC000068.2-201ENST00000608816 460 ntBASIC6.35□□□□□ -1.39
SMARCA1P28370 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SMARCA1P28370 AC126544.2-201ENST00000625174 749 ntBASIC6.35□□□□□ -1.39
SMARCA1P28370 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.35□□□□□ -1.39
SMARCA1P28370 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SMARCA1P28370 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.35□□□□□ -1.39
SMARCA1P28370 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SMARCA1P28370 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SMARCA1P28370 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SMARCA1P28370 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SMARCA1P28370 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SMARCA1P28370 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SMARCA1P28370 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.35□□□□□ -1.39
SMARCA1P28370 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SMARCA1P28370 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SMARCA1P28370 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
SMARCA1P28370 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.34□□□□□ -1.39
SMARCA1P28370 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SMARCA1P28370 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SMARCA1P28370 AC092681.1-201ENST00000297369 291 ntBASIC6.34□□□□□ -1.39
SMARCA1P28370 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
SMARCA1P28370 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
SMARCA1P28370 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SMARCA1P28370 LSM5-206ENST00000409987 504 ntTSL 5 BASIC6.34□□□□□ -1.39
SMARCA1P28370 VN1R51P-201ENST00000411675 945 ntBASIC6.34□□□□□ -1.39
SMARCA1P28370 TCEA1P2-201ENST00000420496 906 ntBASIC6.34□□□□□ -1.39
SMARCA1P28370 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.34□□□□□ -1.39
SMARCA1P28370 TPTE2P3-201ENST00000441562 1189 ntBASIC6.34□□□□□ -1.39
SMARCA1P28370 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC6.34□□□□□ -1.39
SMARCA1P28370 DUXAP8-207ENST00000456786 622 ntBASIC6.34□□□□□ -1.39
SMARCA1P28370 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.34□□□□□ -1.39
SMARCA1P28370 AC018638.3-201ENST00000461273 132 ntBASIC6.34□□□□□ -1.39
SMARCA1P28370 SETP6-201ENST00000479329 568 ntBASIC6.34□□□□□ -1.39
SMARCA1P28370 AC091544.1-201ENST00000484702 348 ntBASIC6.34□□□□□ -1.39
SMARCA1P28370 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC6.34□□□□□ -1.39
SMARCA1P28370 RN7SL547P-201ENST00000490793 290 ntBASIC6.34□□□□□ -1.39
SMARCA1P28370 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.34□□□□□ -1.39
SMARCA1P28370 OR5H3P-201ENST00000502817 919 ntBASIC6.34□□□□□ -1.39
SMARCA1P28370 AC098862.1-201ENST00000504991 413 ntBASIC6.34□□□□□ -1.39
SMARCA1P28370 AC069306.1-201ENST00000507006 843 ntBASIC6.34□□□□□ -1.39
SMARCA1P28370 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.34□□□□□ -1.39
SMARCA1P28370 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SMARCA1P28370 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.34□□□□□ -1.39
SMARCA1P28370 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
SMARCA1P28370 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC6.34□□□□□ -1.39
SMARCA1P28370 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.34□□□□□ -1.39
SMARCA1P28370 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.34□□□□□ -1.39
SMARCA1P28370 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms