Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 OR3D1P-201ENST00000438288 955 ntBASIC5.34□□□□□ -1.55
TNFSF4P23510 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.34□□□□□ -1.55
TNFSF4P23510 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.34□□□□□ -1.55
TNFSF4P23510 YRDCP3-201ENST00000456507 480 ntBASIC5.34□□□□□ -1.55
TNFSF4P23510 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.34□□□□□ -1.55
TNFSF4P23510 AL139824.2-201ENST00000458731 1095 ntBASIC5.34□□□□□ -1.55
TNFSF4P23510 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.34□□□□□ -1.55
TNFSF4P23510 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.34□□□□□ -1.55
TNFSF4P23510 AC104689.1-201ENST00000473356 768 ntBASIC5.34□□□□□ -1.55
TNFSF4P23510 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.34□□□□□ -1.55
TNFSF4P23510 AC109481.1-201ENST00000509173 282 ntBASIC5.34□□□□□ -1.55
TNFSF4P23510 MAST4-IT1-201ENST00000514241 658 ntBASIC5.34□□□□□ -1.55
TNFSF4P23510 RN7SKP183-201ENST00000517169 324 ntBASIC5.34□□□□□ -1.55
TNFSF4P23510 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.34□□□□□ -1.55
TNFSF4P23510 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.34□□□□□ -1.55
TNFSF4P23510 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.34□□□□□ -1.55
TNFSF4P23510 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.34□□□□□ -1.55
TNFSF4P23510 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.34□□□□□ -1.55
TNFSF4P23510 AC092747.2-201ENST00000545069 983 ntBASIC5.34□□□□□ -1.55
TNFSF4P23510 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC5.34□□□□□ -1.55
TNFSF4P23510 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.34□□□□□ -1.55
TNFSF4P23510 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.34□□□□□ -1.55
TNFSF4P23510 AC002519.2-203ENST00000567043 837 ntBASIC5.34□□□□□ -1.55
TNFSF4P23510 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.34□□□□□ -1.55
TNFSF4P23510 AP001357.1-201ENST00000586304 1053 ntBASIC5.34□□□□□ -1.55
TNFSF4P23510 DYNLL1P1-201ENST00000595442 269 ntBASIC5.34□□□□□ -1.55
TNFSF4P23510 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.34□□□□□ -1.55
TNFSF4P23510 AC011497.2-201ENST00000600255 639 ntBASIC5.34□□□□□ -1.55
TNFSF4P23510 SMIM12P1-201ENST00000603004 274 ntBASIC5.34□□□□□ -1.55
TNFSF4P23510 AC091488.1-201ENST00000604239 660 ntBASIC5.34□□□□□ -1.55
TNFSF4P23510 AL392112.1-201ENST00000605115 829 ntBASIC5.34□□□□□ -1.55
TNFSF4P23510 AC096553.1-201ENST00000605169 829 ntBASIC5.34□□□□□ -1.55
TNFSF4P23510 AC092681.3-201ENST00000609463 678 ntBASIC5.34□□□□□ -1.55
TNFSF4P23510 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.34□□□□□ -1.55
TNFSF4P23510 AL135999.3-201ENST00000610501 812 ntBASIC5.34□□□□□ -1.55
TNFSF4P23510 AC024255.1-201ENST00000614376 102 ntBASIC5.34□□□□□ -1.55
TNFSF4P23510 AC009159.2-201ENST00000617603 606 ntBASIC5.34□□□□□ -1.55
TNFSF4P23510 AC011330.2-201ENST00000621680 635 ntBASIC5.34□□□□□ -1.55
TNFSF4P23510 AL157770.1-201ENST00000623049 439 ntBASIC5.34□□□□□ -1.55
TNFSF4P23510 AP002782.1-201ENST00000623107 614 ntBASIC5.34□□□□□ -1.55
TNFSF4P23510 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.34□□□□□ -1.55
TNFSF4P23510 AP002512.4-202ENST00000641599 4530 ntBASIC5.34□□□□□ -1.55
TNFSF4P23510 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
TNFSF4P23510 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.34□□□□□ -1.55
TNFSF4P23510 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.34□□□□□ -1.55
TNFSF4P23510 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
TNFSF4P23510 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
TNFSF4P23510 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
TNFSF4P23510 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.56
TNFSF4P23510 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
TNFSF4P23510 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.56
TNFSF4P23510 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.34□□□□□ -1.56
TNFSF4P23510 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.33□□□□□ -1.56
TNFSF4P23510 AL034370.1-201ENST00000397254 1590 ntBASIC5.33□□□□□ -1.56
TNFSF4P23510 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
TNFSF4P23510 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TNFSF4P23510 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.33□□□□□ -1.56
TNFSF4P23510 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TNFSF4P23510 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
TNFSF4P23510 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
TNFSF4P23510 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.33□□□□□ -1.56
TNFSF4P23510 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
TNFSF4P23510 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TNFSF4P23510 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TNFSF4P23510 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TNFSF4P23510 AL138820.1-201ENST00000617901 5305 ntBASIC5.33□□□□□ -1.56
TNFSF4P23510 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
TNFSF4P23510 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.33□□□□□ -1.56
TNFSF4P23510 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TNFSF4P23510 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TNFSF4P23510 HMGB1P5-201ENST00000255320 642 ntBASIC5.33□□□□□ -1.56
TNFSF4P23510 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TNFSF4P23510 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
TNFSF4P23510 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.33□□□□□ -1.56
TNFSF4P23510 RNA5SP346-201ENST00000363541 121 ntBASIC5.33□□□□□ -1.56
TNFSF4P23510 SNORD8-201ENST00000363915 110 ntBASIC5.33□□□□□ -1.56
TNFSF4P23510 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.33□□□□□ -1.56
TNFSF4P23510 RNU6-413P-201ENST00000384115 107 ntBASIC5.33□□□□□ -1.56
TNFSF4P23510 TAS2R15P-201ENST00000390674 928 ntBASIC5.33□□□□□ -1.56
TNFSF4P23510 GAPDHP42-201ENST00000406848 981 ntBASIC5.33□□□□□ -1.56
TNFSF4P23510 AC099535.1-201ENST00000408928 371 ntBASIC5.33□□□□□ -1.56
TNFSF4P23510 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC5.33□□□□□ -1.56
TNFSF4P23510 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TNFSF4P23510 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC5.33□□□□□ -1.56
TNFSF4P23510 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.33□□□□□ -1.56
TNFSF4P23510 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.33□□□□□ -1.56
TNFSF4P23510 AC094019.1-201ENST00000434678 472 ntBASIC5.33□□□□□ -1.56
TNFSF4P23510 AL353597.2-202ENST00000434901 373 ntBASIC5.33□□□□□ -1.56
TNFSF4P23510 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.33□□□□□ -1.56
TNFSF4P23510 PPIAP10-201ENST00000438675 458 ntBASIC5.33□□□□□ -1.56
TNFSF4P23510 ARMC4P1-201ENST00000438905 707 ntBASIC5.33□□□□□ -1.56
TNFSF4P23510 AC007327.1-201ENST00000447461 264 ntBASIC5.33□□□□□ -1.56
TNFSF4P23510 HMGB1P7-201ENST00000450921 612 ntBASIC5.33□□□□□ -1.56
TNFSF4P23510 AC233982.1-201ENST00000451247 436 ntBASIC5.33□□□□□ -1.56
TNFSF4P23510 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.33□□□□□ -1.56
TNFSF4P23510 AC011037.1-201ENST00000483964 558 ntBASIC5.33□□□□□ -1.56
TNFSF4P23510 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.33□□□□□ -1.56
TNFSF4P23510 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TNFSF4P23510 AC112484.3-201ENST00000505910 329 ntBASIC5.33□□□□□ -1.56
TNFSF4P23510 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 153.2 ms