Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.48□□□□□ -1.69
USF1P22415 AC090142.2-201ENST00000483263 416 ntBASIC4.48□□□□□ -1.69
USF1P22415 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.48□□□□□ -1.69
USF1P22415 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
USF1P22415 AC109464.1-201ENST00000511091 819 ntBASIC4.48□□□□□ -1.69
USF1P22415 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.48□□□□□ -1.69
USF1P22415 RN7SKP147-201ENST00000517154 244 ntBASIC4.48□□□□□ -1.69
USF1P22415 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.48□□□□□ -1.69
USF1P22415 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.48□□□□□ -1.69
USF1P22415 OR10D4P-201ENST00000525892 951 ntBASIC4.48□□□□□ -1.69
USF1P22415 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.48□□□□□ -1.69
USF1P22415 PCNPP1-201ENST00000552501 511 ntBASIC4.48□□□□□ -1.69
USF1P22415 AC127381.1-201ENST00000555979 939 ntBASIC4.48□□□□□ -1.69
USF1P22415 NMNAT1P5-201ENST00000559657 841 ntBASIC4.48□□□□□ -1.69
USF1P22415 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.48□□□□□ -1.69
USF1P22415 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
USF1P22415 AC011840.5-201ENST00000582125 771 ntBASIC4.48□□□□□ -1.69
USF1P22415 MIR4660-201ENST00000583549 74 ntBASIC4.48□□□□□ -1.69
USF1P22415 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.48□□□□□ -1.69
USF1P22415 AC011447.4-201ENST00000587562 111 ntBASIC4.48□□□□□ -1.69
USF1P22415 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.48□□□□□ -1.69
USF1P22415 AL162574.1-201ENST00000615702 950 ntBASIC4.48□□□□□ -1.69
USF1P22415 AL445528.2-201ENST00000620582 470 ntBASIC4.48□□□□□ -1.69
USF1P22415 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.48□□□□□ -1.69
USF1P22415 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.48□□□□□ -1.69
USF1P22415 TMEM30CP-203ENST00000637814 1035 ntBASIC4.48□□□□□ -1.69
USF1P22415 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
USF1P22415 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.48□□□□□ -1.69
USF1P22415 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
USF1P22415 SCARNA15-201ENST00000607520 4325 ntBASIC4.48□□□□□ -1.69
USF1P22415 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
USF1P22415 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
USF1P22415 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
USF1P22415 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.48□□□□□ -1.69
USF1P22415 AC104964.3-201ENST00000606115 2860 ntBASIC4.47□□□□□ -1.69
USF1P22415 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
USF1P22415 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.47□□□□□ -1.69
USF1P22415 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
USF1P22415 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
USF1P22415 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
USF1P22415 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
USF1P22415 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.47□□□□□ -1.69
USF1P22415 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.47□□□□□ -1.69
USF1P22415 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.47□□□□□ -1.69
USF1P22415 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.47□□□□□ -1.69
USF1P22415 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.47□□□□□ -1.69
USF1P22415 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.47□□□□□ -1.69
USF1P22415 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
USF1P22415 MIR137-201ENST00000385223 102 ntBASIC4.47□□□□□ -1.69
USF1P22415 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.47□□□□□ -1.69
USF1P22415 AL109941.1-201ENST00000401925 229 ntBASIC4.47□□□□□ -1.69
USF1P22415 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
USF1P22415 GPS2P1-201ENST00000411761 986 ntBASIC4.47□□□□□ -1.69
USF1P22415 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
USF1P22415 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.47□□□□□ -1.69
USF1P22415 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.47□□□□□ -1.69
USF1P22415 AC009784.1-201ENST00000426484 460 ntBASIC4.47□□□□□ -1.69
USF1P22415 RBMY2QP-201ENST00000429799 1147 ntBASIC4.47□□□□□ -1.69
USF1P22415 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.47□□□□□ -1.69
USF1P22415 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.47□□□□□ -1.69
USF1P22415 AC009127.1-201ENST00000467090 155 ntBASIC4.47□□□□□ -1.69
USF1P22415 AC092754.1-201ENST00000472975 479 ntBASIC4.47□□□□□ -1.69
USF1P22415 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.47□□□□□ -1.69
USF1P22415 GTF2F2P1-201ENST00000511083 675 ntBASIC4.47□□□□□ -1.69
USF1P22415 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.47□□□□□ -1.69
USF1P22415 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4.47□□□□□ -1.69
USF1P22415 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.47□□□□□ -1.69
USF1P22415 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.47□□□□□ -1.69
USF1P22415 AP004607.2-201ENST00000533949 322 ntBASIC4.47□□□□□ -1.69
USF1P22415 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
USF1P22415 MIR3934-201ENST00000579806 107 ntBASIC4.47□□□□□ -1.69
USF1P22415 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.47□□□□□ -1.69
USF1P22415 AC009597.2-201ENST00000604659 592 ntBASIC4.47□□□□□ -1.69
USF1P22415 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.47□□□□□ -1.69
USF1P22415 EIF3FP1-201ENST00000613970 806 ntBASIC4.47□□□□□ -1.69
USF1P22415 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.47□□□□□ -1.69
USF1P22415 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
USF1P22415 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
USF1P22415 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
USF1P22415 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
USF1P22415 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
USF1P22415 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
USF1P22415 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
USF1P22415 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
USF1P22415 AC068870.1-201ENST00000563737 2455 ntBASIC4.47□□□□□ -1.69
USF1P22415 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
USF1P22415 AC233968.1-201ENST00000611212 1300 ntBASIC4.46□□□□□ -1.69
USF1P22415 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
USF1P22415 AL359715.3-201ENST00000569267 2123 ntBASIC4.46□□□□□ -1.69
USF1P22415 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
USF1P22415 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.46□□□□□ -1.69
USF1P22415 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
USF1P22415 TTC39DP-201ENST00000416781 1688 ntBASIC4.46□□□□□ -1.7
USF1P22415 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
USF1P22415 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
USF1P22415 AL035419.1-201ENST00000397037 564 ntBASIC4.46□□□□□ -1.7
USF1P22415 OR4K12P-201ENST00000406538 961 ntBASIC4.46□□□□□ -1.7
USF1P22415 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.46□□□□□ -1.7
USF1P22415 RPSAP35-201ENST00000413753 818 ntBASIC4.46□□□□□ -1.7
USF1P22415 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 144.9 ms