Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.14□□□□□ -1.59
XRCC1P18887 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.14□□□□□ -1.59
XRCC1P18887 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.14□□□□□ -1.59
XRCC1P18887 AC147055.3-201ENST00000510547 851 ntBASIC5.14□□□□□ -1.59
XRCC1P18887 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.14□□□□□ -1.59
XRCC1P18887 AC022360.1-201ENST00000521058 340 ntBASIC5.14□□□□□ -1.59
XRCC1P18887 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.14□□□□□ -1.59
XRCC1P18887 OR8A2P-201ENST00000528631 952 ntBASIC5.14□□□□□ -1.59
XRCC1P18887 AC134349.2-201ENST00000535136 910 ntBASIC5.14□□□□□ -1.59
XRCC1P18887 AC006349.1-201ENST00000555526 235 ntBASIC5.14□□□□□ -1.59
XRCC1P18887 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.14□□□□□ -1.59
XRCC1P18887 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.14□□□□□ -1.59
XRCC1P18887 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.14□□□□□ -1.59
XRCC1P18887 AC011447.4-201ENST00000587562 111 ntBASIC5.14□□□□□ -1.59
XRCC1P18887 AC006272.2-201ENST00000594725 163 ntBASIC5.14□□□□□ -1.59
XRCC1P18887 SNORA35B-201ENST00000607417 129 ntBASIC5.14□□□□□ -1.59
XRCC1P18887 AL021707.7-201ENST00000607991 416 ntBASIC5.14□□□□□ -1.59
XRCC1P18887 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.14□□□□□ -1.59
XRCC1P18887 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
XRCC1P18887 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
XRCC1P18887 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
XRCC1P18887 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
XRCC1P18887 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
XRCC1P18887 THAP12P8-201ENST00000447914 2115 ntBASIC5.14□□□□□ -1.59
XRCC1P18887 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
XRCC1P18887 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
XRCC1P18887 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.13□□□□□ -1.59
XRCC1P18887 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.13□□□□□ -1.59
XRCC1P18887 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.13□□□□□ -1.59
XRCC1P18887 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
XRCC1P18887 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
XRCC1P18887 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
XRCC1P18887 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
XRCC1P18887 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
XRCC1P18887 MIR600-201ENST00000385007 98 ntBASIC5.13□□□□□ -1.59
XRCC1P18887 AC007068.1-201ENST00000396690 844 ntBASIC5.13□□□□□ -1.59
XRCC1P18887 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.13□□□□□ -1.59
XRCC1P18887 AC002524.1-201ENST00000411687 547 ntBASIC5.13□□□□□ -1.59
XRCC1P18887 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.13□□□□□ -1.59
XRCC1P18887 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.13□□□□□ -1.59
XRCC1P18887 GAPDHP58-201ENST00000438477 1006 ntBASIC5.13□□□□□ -1.59
XRCC1P18887 CEACAMP7-201ENST00000444105 496 ntBASIC5.13□□□□□ -1.59
XRCC1P18887 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.13□□□□□ -1.59
XRCC1P18887 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.13□□□□□ -1.59
XRCC1P18887 AC022133.1-201ENST00000490961 571 ntBASIC5.13□□□□□ -1.59
XRCC1P18887 RPS24P16-201ENST00000497294 392 ntBASIC5.13□□□□□ -1.59
XRCC1P18887 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
XRCC1P18887 AC012400.1-201ENST00000518452 381 ntBASIC5.13□□□□□ -1.59
XRCC1P18887 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
XRCC1P18887 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.13□□□□□ -1.59
XRCC1P18887 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC5.13□□□□□ -1.59
XRCC1P18887 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.13□□□□□ -1.59
XRCC1P18887 OR11J2P-201ENST00000555298 907 ntBASIC5.13□□□□□ -1.59
XRCC1P18887 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
XRCC1P18887 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.13□□□□□ -1.59
XRCC1P18887 AC006116.3-201ENST00000592968 361 ntBASIC5.13□□□□□ -1.59
XRCC1P18887 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.13□□□□□ -1.59
XRCC1P18887 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
XRCC1P18887 AL162431.4-201ENST00000604674 411 ntBASIC5.13□□□□□ -1.59
XRCC1P18887 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.13□□□□□ -1.59
XRCC1P18887 AC009163.6-201ENST00000612367 342 ntBASIC5.13□□□□□ -1.59
XRCC1P18887 AL356752.1-201ENST00000615844 593 ntBASIC5.13□□□□□ -1.59
XRCC1P18887 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.13□□□□□ -1.59
XRCC1P18887 AC099494.2-201ENST00000623371 978 ntBASIC5.13□□□□□ -1.59
XRCC1P18887 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
XRCC1P18887 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.13□□□□□ -1.59
XRCC1P18887 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
XRCC1P18887 CR382285.2-201ENST00000624662 1495 ntBASIC5.13□□□□□ -1.59
XRCC1P18887 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
XRCC1P18887 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
XRCC1P18887 PANDAR-201ENST00000629595 1506 ntBASIC5.13□□□□□ -1.59
XRCC1P18887 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
XRCC1P18887 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
XRCC1P18887 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
XRCC1P18887 AL138820.1-201ENST00000617901 5305 ntBASIC5.12□□□□□ -1.59
XRCC1P18887 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
XRCC1P18887 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
XRCC1P18887 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
XRCC1P18887 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
XRCC1P18887 RNA5SP305-201ENST00000362665 119 ntBASIC5.12□□□□□ -1.59
XRCC1P18887 U3.3-201ENST00000362986 216 ntBASIC5.12□□□□□ -1.59
XRCC1P18887 OR8V1P-201ENST00000395193 873 ntBASIC5.12□□□□□ -1.59
XRCC1P18887 AL645927.1-201ENST00000396783 406 ntBASIC5.12□□□□□ -1.59
XRCC1P18887 RPL10P10-201ENST00000403509 664 ntBASIC5.12□□□□□ -1.59
XRCC1P18887 AL589994.1-201ENST00000404962 340 ntBASIC5.12□□□□□ -1.59
XRCC1P18887 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.12□□□□□ -1.59
XRCC1P18887 PCNPP4-201ENST00000414817 517 ntBASIC5.12□□□□□ -1.59
XRCC1P18887 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.12□□□□□ -1.59
XRCC1P18887 RPS4XP16-201ENST00000427198 791 ntBASIC5.12□□□□□ -1.59
XRCC1P18887 AC124944.2-201ENST00000429866 1242 ntBASIC5.12□□□□□ -1.59
XRCC1P18887 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.12□□□□□ -1.59
XRCC1P18887 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.12□□□□□ -1.59
XRCC1P18887 AC046176.1-201ENST00000435260 1170 ntBASIC5.12□□□□□ -1.59
XRCC1P18887 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.12□□□□□ -1.59
XRCC1P18887 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.12□□□□□ -1.59
XRCC1P18887 AC009127.1-201ENST00000467090 155 ntBASIC5.12□□□□□ -1.59
XRCC1P18887 RN7SL329P-201ENST00000467740 299 ntBASIC5.12□□□□□ -1.59
XRCC1P18887 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
XRCC1P18887 AC004453.1-201ENST00000487895 408 ntBASIC5.12□□□□□ -1.59
XRCC1P18887 RPL32P9-201ENST00000487963 407 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms