Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.4□□□□□ -1.7
CTLA4P16410 ECM1P2-201ENST00000503354 1577 ntBASIC4.4□□□□□ -1.7
CTLA4P16410 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CTLA4P16410 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
CTLA4P16410 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
CTLA4P16410 AC009643.2-201ENST00000603543 1448 ntBASIC4.4□□□□□ -1.7
CTLA4P16410 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CTLA4P16410 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
CTLA4P16410 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
CTLA4P16410 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
CTLA4P16410 RNU6-171P-201ENST00000384354 107 ntBASIC4.4□□□□□ -1.71
CTLA4P16410 MIR223-201ENST00000385204 110 ntBASIC4.4□□□□□ -1.71
CTLA4P16410 U3.36-201ENST00000408418 213 ntBASIC4.4□□□□□ -1.71
CTLA4P16410 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CTLA4P16410 OR2AH1P-201ENST00000425717 928 ntBASIC4.4□□□□□ -1.71
CTLA4P16410 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.4□□□□□ -1.71
CTLA4P16410 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.4□□□□□ -1.71
CTLA4P16410 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.4□□□□□ -1.71
CTLA4P16410 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.4□□□□□ -1.71
CTLA4P16410 CNOT7P2-201ENST00000441051 832 ntBASIC4.4□□□□□ -1.71
CTLA4P16410 OR7E125P-201ENST00000443450 846 ntBASIC4.4□□□□□ -1.71
CTLA4P16410 NDUFA5P8-201ENST00000449019 346 ntBASIC4.4□□□□□ -1.71
CTLA4P16410 AURKAPS1-201ENST00000451805 1212 ntBASIC4.4□□□□□ -1.71
CTLA4P16410 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.4□□□□□ -1.71
CTLA4P16410 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.4□□□□□ -1.71
CTLA4P16410 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.4□□□□□ -1.71
CTLA4P16410 RPS18P6-201ENST00000476880 458 ntBASIC4.4□□□□□ -1.71
CTLA4P16410 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.4□□□□□ -1.71
CTLA4P16410 HIGD1AP14-201ENST00000507617 282 ntBASIC4.4□□□□□ -1.71
CTLA4P16410 COX6B1P5-201ENST00000509843 249 ntBASIC4.4□□□□□ -1.71
CTLA4P16410 RNA5SP249-201ENST00000516127 99 ntBASIC4.4□□□□□ -1.71
CTLA4P16410 RNA5SP43-201ENST00000516559 110 ntBASIC4.4□□□□□ -1.71
CTLA4P16410 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.4□□□□□ -1.71
CTLA4P16410 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CTLA4P16410 EIF4A2P5-201ENST00000529914 499 ntBASIC4.4□□□□□ -1.71
CTLA4P16410 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.4□□□□□ -1.71
CTLA4P16410 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.4□□□□□ -1.71
CTLA4P16410 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
CTLA4P16410 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.4□□□□□ -1.71
CTLA4P16410 MIR4489-201ENST00000578869 62 ntBASIC4.4□□□□□ -1.71
CTLA4P16410 AC011447.4-201ENST00000587562 111 ntBASIC4.4□□□□□ -1.71
CTLA4P16410 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.4□□□□□ -1.71
CTLA4P16410 AC005377.1-201ENST00000605126 456 ntBASIC4.4□□□□□ -1.71
CTLA4P16410 AL627230.1-201ENST00000613077 211 ntBASIC4.4□□□□□ -1.71
CTLA4P16410 AL049794.2-201ENST00000616301 365 ntBASIC4.4□□□□□ -1.71
CTLA4P16410 AL591926.8-201ENST00000616876 211 ntBASIC4.4□□□□□ -1.71
CTLA4P16410 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.4□□□□□ -1.71
CTLA4P16410 AC087821.1-201ENST00000623639 567 ntBASIC4.4□□□□□ -1.71
CTLA4P16410 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.4□□□□□ -1.71
CTLA4P16410 AC004808.2-201ENST00000627965 773 ntBASIC4.4□□□□□ -1.71
CTLA4P16410 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.4□□□□□ -1.71
CTLA4P16410 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CTLA4P16410 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.4□□□□□ -1.71
CTLA4P16410 AC025574.1-201ENST00000554784 1653 ntBASIC4.4□□□□□ -1.71
CTLA4P16410 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CTLA4P16410 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CTLA4P16410 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CTLA4P16410 CDC27P2-201ENST00000425026 1922 ntBASIC4.4□□□□□ -1.71
CTLA4P16410 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CTLA4P16410 ZNF733P-202ENST00000444809 1573 ntBASIC4.4□□□□□ -1.71
CTLA4P16410 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
CTLA4P16410 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
CTLA4P16410 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.39□□□□□ -1.71
CTLA4P16410 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTLA4P16410 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.39□□□□□ -1.71
CTLA4P16410 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CTLA4P16410 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.39□□□□□ -1.71
CTLA4P16410 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTLA4P16410 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CTLA4P16410 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.39□□□□□ -1.71
CTLA4P16410 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.39□□□□□ -1.71
CTLA4P16410 AP000534.2-201ENST00000412729 568 ntBASIC4.39□□□□□ -1.71
CTLA4P16410 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CTLA4P16410 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.39□□□□□ -1.71
CTLA4P16410 RHOT1P3-201ENST00000436571 331 ntBASIC4.39□□□□□ -1.71
CTLA4P16410 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.39□□□□□ -1.71
CTLA4P16410 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.39□□□□□ -1.71
CTLA4P16410 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.39□□□□□ -1.71
CTLA4P16410 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.39□□□□□ -1.71
CTLA4P16410 BX284632.1-201ENST00000478218 541 ntBASIC4.39□□□□□ -1.71
CTLA4P16410 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CTLA4P16410 RN7SL30P-201ENST00000488416 306 ntBASIC4.39□□□□□ -1.71
CTLA4P16410 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.39□□□□□ -1.71
CTLA4P16410 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.39□□□□□ -1.71
CTLA4P16410 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.39□□□□□ -1.71
CTLA4P16410 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTLA4P16410 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.39□□□□□ -1.71
CTLA4P16410 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.39□□□□□ -1.71
CTLA4P16410 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.39□□□□□ -1.71
CTLA4P16410 RNA5SP303-201ENST00000516192 130 ntBASIC4.39□□□□□ -1.71
CTLA4P16410 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.39□□□□□ -1.71
CTLA4P16410 AC026688.1-201ENST00000520639 1168 ntBASIC4.39□□□□□ -1.71
CTLA4P16410 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.39□□□□□ -1.71
CTLA4P16410 OR7E128P-201ENST00000532736 1024 ntBASIC4.39□□□□□ -1.71
CTLA4P16410 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTLA4P16410 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.39□□□□□ -1.71
CTLA4P16410 CYCSP40-201ENST00000575927 294 ntBASIC4.39□□□□□ -1.71
CTLA4P16410 MIR1269B-201ENST00000580405 75 ntBASIC4.39□□□□□ -1.71
CTLA4P16410 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.39□□□□□ -1.71
CTLA4P16410 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms