Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CD28P10747 MIR4691-201ENST00000583764 85 ntBASIC4.04□□□□□ -1.76
CD28P10747 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.04□□□□□ -1.76
CD28P10747 AC011487.3-201ENST00000593607 453 ntBASIC4.04□□□□□ -1.76
CD28P10747 AC104785.1-201ENST00000603220 588 ntBASIC4.04□□□□□ -1.76
CD28P10747 AL354950.1-201ENST00000614150 568 ntBASIC4.04□□□□□ -1.76
CD28P10747 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.04□□□□□ -1.76
CD28P10747 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.04□□□□□ -1.76
CD28P10747 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CD28P10747 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.04□□□□□ -1.76
CD28P10747 AP000473.2-201ENST00000602659 1537 ntBASIC4.04□□□□□ -1.76
CD28P10747 MIPEPP2-201ENST00000422560 1819 ntBASIC4.04□□□□□ -1.76
CD28P10747 AC100757.1-201ENST00000616872 1835 ntBASIC4.04□□□□□ -1.76
CD28P10747 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.04□□□□□ -1.76
CD28P10747 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CD28P10747 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.04□□□□□ -1.76
CD28P10747 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
CD28P10747 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.04□□□□□ -1.76
CD28P10747 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CD28P10747 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CD28P10747 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CD28P10747 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.04□□□□□ -1.76
CD28P10747 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.04□□□□□ -1.76
CD28P10747 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.04□□□□□ -1.76
CD28P10747 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CD28P10747 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CD28P10747 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CD28P10747 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CD28P10747 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CD28P10747 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.03□□□□□ -1.76
CD28P10747 TCP11X1-202ENST00000622971 1372 ntBASIC4.03□□□□□ -1.76
CD28P10747 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.03□□□□□ -1.76
CD28P10747 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CD28P10747 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
CD28P10747 AC004158.1-201ENST00000564508 4319 ntBASIC4.03□□□□□ -1.76
CD28P10747 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
CD28P10747 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CD28P10747 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CD28P10747 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CD28P10747 GPS2P1-201ENST00000411761 986 ntBASIC4.03□□□□□ -1.76
CD28P10747 COX6B1P1-201ENST00000415962 213 ntBASIC4.03□□□□□ -1.76
CD28P10747 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.03□□□□□ -1.76
CD28P10747 NDUFB4P8-201ENST00000435351 367 ntBASIC4.03□□□□□ -1.76
CD28P10747 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.03□□□□□ -1.76
CD28P10747 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.03□□□□□ -1.76
CD28P10747 AP000797.2-201ENST00000475768 606 ntBASIC4.03□□□□□ -1.76
CD28P10747 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.03□□□□□ -1.76
CD28P10747 IGBP1P4-201ENST00000503202 879 ntBASIC4.03□□□□□ -1.76
CD28P10747 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.03□□□□□ -1.76
CD28P10747 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.03□□□□□ -1.76
CD28P10747 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.03□□□□□ -1.76
CD28P10747 HIGD1AP5-201ENST00000529959 259 ntBASIC4.03□□□□□ -1.76
CD28P10747 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.03□□□□□ -1.76
CD28P10747 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CD28P10747 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
CD28P10747 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.03□□□□□ -1.76
CD28P10747 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.03□□□□□ -1.76
CD28P10747 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.03□□□□□ -1.76
CD28P10747 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
CD28P10747 AL162431.4-201ENST00000604674 411 ntBASIC4.03□□□□□ -1.76
CD28P10747 AC005084.1-201ENST00000605160 304 ntBASIC4.03□□□□□ -1.76
CD28P10747 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.03□□□□□ -1.76
CD28P10747 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CD28P10747 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CD28P10747 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CD28P10747 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CD28P10747 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CD28P10747 NXF4-202ENST00000416098 1465 ntBASIC4.03□□□□□ -1.76
CD28P10747 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CD28P10747 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CD28P10747 IRF5P1-201ENST00000504852 2164 ntBASIC4.03□□□□□ -1.76
CD28P10747 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CD28P10747 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CD28P10747 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CD28P10747 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CD28P10747 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.03□□□□□ -1.76
CD28P10747 AC006484.1-201ENST00000435086 1884 ntBASIC4.03□□□□□ -1.77
CD28P10747 AC079298.1-201ENST00000625026 1619 ntBASIC4.03□□□□□ -1.77
CD28P10747 AC068870.3-201ENST00000625077 2536 ntBASIC4.02□□□□□ -1.77
CD28P10747 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
CD28P10747 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
CD28P10747 AC006206.1-201ENST00000544842 3387 ntBASIC4.02□□□□□ -1.77
CD28P10747 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.02□□□□□ -1.77
CD28P10747 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
CD28P10747 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
CD28P10747 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
CD28P10747 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CD28P10747 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CD28P10747 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CD28P10747 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CD28P10747 AL353625.1-202ENST00000366273 571 ntBASIC4.02□□□□□ -1.77
CD28P10747 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.02□□□□□ -1.77
CD28P10747 AC007068.1-201ENST00000396690 844 ntBASIC4.02□□□□□ -1.77
CD28P10747 GAPDHP15-201ENST00000398586 975 ntBASIC4.02□□□□□ -1.77
CD28P10747 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CD28P10747 AL078599.1-201ENST00000402075 293 ntBASIC4.02□□□□□ -1.77
CD28P10747 RN7SKP114-201ENST00000410327 279 ntBASIC4.02□□□□□ -1.77
CD28P10747 OR2AM1P-201ENST00000422137 422 ntBASIC4.02□□□□□ -1.77
CD28P10747 DDX39BP1-205ENST00000422507 192 ntBASIC4.02□□□□□ -1.77
CD28P10747 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 149.4 ms