Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AC005000.1-201ENST00000536192 288 ntBASIC5□□□□□ -1.61
HOXC4P09017 AL512310.9-201ENST00000553311 948 ntBASIC5□□□□□ -1.61
HOXC4P09017 MIR3934-201ENST00000579806 107 ntBASIC5□□□□□ -1.61
HOXC4P09017 MIR4436B2-201ENST00000581415 91 ntBASIC5□□□□□ -1.61
HOXC4P09017 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5□□□□□ -1.61
HOXC4P09017 MIR4436B1-201ENST00000583272 91 ntBASIC5□□□□□ -1.61
HOXC4P09017 BNIP3P35-201ENST00000604530 490 ntBASIC5□□□□□ -1.61
HOXC4P09017 MEMO1P5-201ENST00000604810 406 ntBASIC5□□□□□ -1.61
HOXC4P09017 AP001521.2-201ENST00000608772 546 ntBASIC5□□□□□ -1.61
HOXC4P09017 AC108359.1-201ENST00000616451 1211 ntBASIC5□□□□□ -1.61
HOXC4P09017 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5□□□□□ -1.61
HOXC4P09017 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5□□□□□ -1.61
HOXC4P09017 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HOXC4P09017 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
HOXC4P09017 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5□□□□□ -1.61
HOXC4P09017 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5□□□□□ -1.61
HOXC4P09017 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5□□□□□ -1.61
HOXC4P09017 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
HOXC4P09017 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HOXC4P09017 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HOXC4P09017 AC116158.1-201ENST00000560231 2129 ntBASIC5□□□□□ -1.61
HOXC4P09017 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5□□□□□ -1.61
HOXC4P09017 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5□□□□□ -1.61
HOXC4P09017 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HOXC4P09017 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.99□□□□□ -1.61
HOXC4P09017 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HOXC4P09017 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HOXC4P09017 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.99□□□□□ -1.61
HOXC4P09017 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HOXC4P09017 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HOXC4P09017 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
HOXC4P09017 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.99□□□□□ -1.61
HOXC4P09017 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HOXC4P09017 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.99□□□□□ -1.61
HOXC4P09017 RN7SKP149-201ENST00000363008 344 ntBASIC4.99□□□□□ -1.61
HOXC4P09017 AC007618.1-201ENST00000366455 732 ntBASIC4.99□□□□□ -1.61
HOXC4P09017 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.99□□□□□ -1.61
HOXC4P09017 CHEK2P3-201ENST00000416118 248 ntBASIC4.99□□□□□ -1.61
HOXC4P09017 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXC4P09017 AC046176.1-201ENST00000435260 1170 ntBASIC4.99□□□□□ -1.61
HOXC4P09017 PRPF38AP2-201ENST00000438179 851 ntBASIC4.99□□□□□ -1.61
HOXC4P09017 RPS29P9-201ENST00000440360 171 ntBASIC4.99□□□□□ -1.61
HOXC4P09017 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.99□□□□□ -1.61
HOXC4P09017 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HOXC4P09017 IGHV5-78-201ENST00000450948 295 ntBASIC4.99□□□□□ -1.61
HOXC4P09017 AC023424.1-201ENST00000496058 459 ntBASIC4.99□□□□□ -1.61
HOXC4P09017 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.99□□□□□ -1.61
HOXC4P09017 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXC4P09017 AC105420.1-201ENST00000504389 582 ntBASIC4.99□□□□□ -1.61
HOXC4P09017 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXC4P09017 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.99□□□□□ -1.61
HOXC4P09017 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXC4P09017 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.99□□□□□ -1.61
HOXC4P09017 AP006245.2-201ENST00000522004 300 ntBASIC4.99□□□□□ -1.61
HOXC4P09017 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.99□□□□□ -1.61
HOXC4P09017 MTCYBP13-201ENST00000578634 1093 ntBASIC4.99□□□□□ -1.61
HOXC4P09017 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXC4P09017 AP002884.5-201ENST00000595053 1132 ntBASIC4.99□□□□□ -1.61
HOXC4P09017 BNIP3P41-202ENST00000616656 861 ntBASIC4.99□□□□□ -1.61
HOXC4P09017 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.99□□□□□ -1.61
HOXC4P09017 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HOXC4P09017 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
HOXC4P09017 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HOXC4P09017 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.99□□□□□ -1.61
HOXC4P09017 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.99□□□□□ -1.61
HOXC4P09017 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HOXC4P09017 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
HOXC4P09017 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.99□□□□□ -1.61
HOXC4P09017 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HOXC4P09017 SCARNA15-201ENST00000607520 4325 ntBASIC4.99□□□□□ -1.61
HOXC4P09017 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
HOXC4P09017 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXC4P09017 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.98□□□□□ -1.61
HOXC4P09017 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.98□□□□□ -1.61
HOXC4P09017 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.98□□□□□ -1.61
HOXC4P09017 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.98□□□□□ -1.61
HOXC4P09017 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXC4P09017 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HOXC4P09017 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HOXC4P09017 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HOXC4P09017 AL021331.1-201ENST00000402817 582 ntBASIC4.98□□□□□ -1.61
HOXC4P09017 COX6B1P1-201ENST00000415962 213 ntBASIC4.98□□□□□ -1.61
HOXC4P09017 OR2AM1P-201ENST00000422137 422 ntBASIC4.98□□□□□ -1.61
HOXC4P09017 AL136231.1-201ENST00000429407 730 ntBASIC4.98□□□□□ -1.61
HOXC4P09017 BX323845.1-201ENST00000432417 179 ntBASIC4.98□□□□□ -1.61
HOXC4P09017 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.98□□□□□ -1.61
HOXC4P09017 AC006466.1-201ENST00000438721 289 ntBASIC4.98□□□□□ -1.61
HOXC4P09017 CBX1P2-201ENST00000453841 458 ntBASIC4.98□□□□□ -1.61
HOXC4P09017 RPS3AP41-201ENST00000462701 778 ntBASIC4.98□□□□□ -1.61
HOXC4P09017 RN7SL319P-201ENST00000480656 221 ntBASIC4.98□□□□□ -1.61
HOXC4P09017 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.98□□□□□ -1.61
HOXC4P09017 AC010350.1-201ENST00000504908 231 ntBASIC4.98□□□□□ -1.61
HOXC4P09017 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.98□□□□□ -1.61
HOXC4P09017 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.98□□□□□ -1.61
HOXC4P09017 BGLT3-201ENST00000564523 994 ntBASIC4.98□□□□□ -1.61
HOXC4P09017 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.98□□□□□ -1.61
HOXC4P09017 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.98□□□□□ -1.61
HOXC4P09017 AP005262.1-201ENST00000582646 997 ntBASIC4.98□□□□□ -1.61
HOXC4P09017 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.98□□□□□ -1.61
HOXC4P09017 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms