Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.31□□□□□ -1.72
CD74P04233 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CD74P04233 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CD74P04233 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CD74P04233 SLC9B1P1-201ENST00000331172 1337 ntBASIC4.31□□□□□ -1.72
CD74P04233 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CD74P04233 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CD74P04233 RN7SKP224-201ENST00000364140 325 ntBASIC4.31□□□□□ -1.72
CD74P04233 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.31□□□□□ -1.72
CD74P04233 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CD74P04233 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CD74P04233 AL672167.2-201ENST00000377164 879 ntBASIC4.31□□□□□ -1.72
CD74P04233 AL133388.1-201ENST00000404509 287 ntBASIC4.31□□□□□ -1.72
CD74P04233 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.31□□□□□ -1.72
CD74P04233 SEPT7P8-201ENST00000413308 775 ntBASIC4.31□□□□□ -1.72
CD74P04233 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.31□□□□□ -1.72
CD74P04233 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.31□□□□□ -1.72
CD74P04233 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.31□□□□□ -1.72
CD74P04233 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.31□□□□□ -1.72
CD74P04233 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CD74P04233 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CD74P04233 AC108751.2-201ENST00000469993 231 ntBASIC4.31□□□□□ -1.72
CD74P04233 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.31□□□□□ -1.72
CD74P04233 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.31□□□□□ -1.72
CD74P04233 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
CD74P04233 IGKV3D-34-201ENST00000522638 302 ntBASIC4.31□□□□□ -1.72
CD74P04233 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CD74P04233 AC068305.2-201ENST00000550567 1205 ntBASIC4.31□□□□□ -1.72
CD74P04233 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.31□□□□□ -1.72
CD74P04233 SNORD39.2-201ENST00000579995 76 ntBASIC4.31□□□□□ -1.72
CD74P04233 AP001496.3-201ENST00000580230 913 ntBASIC4.31□□□□□ -1.72
CD74P04233 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.31□□□□□ -1.72
CD74P04233 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.31□□□□□ -1.72
CD74P04233 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.31□□□□□ -1.72
CD74P04233 OR7M1P-201ENST00000608946 533 ntBASIC4.31□□□□□ -1.72
CD74P04233 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CD74P04233 FO681491.1-202ENST00000623392 737 ntBASIC4.31□□□□□ -1.72
CD74P04233 CU639417.4-201ENST00000623928 207 ntBASIC4.31□□□□□ -1.72
CD74P04233 AP003499.2-201ENST00000624100 483 ntBASIC4.31□□□□□ -1.72
CD74P04233 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CD74P04233 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC4.31□□□□□ -1.72
CD74P04233 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CD74P04233 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.31□□□□□ -1.72
CD74P04233 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CD74P04233 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CD74P04233 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CD74P04233 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.31□□□□□ -1.72
CD74P04233 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CD74P04233 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CD74P04233 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CD74P04233 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CD74P04233 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
CD74P04233 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.3□□□□□ -1.72
CD74P04233 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CD74P04233 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.3□□□□□ -1.72
CD74P04233 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CD74P04233 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CD74P04233 RNA5SP90-201ENST00000364801 99 ntBASIC4.3□□□□□ -1.72
CD74P04233 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CD74P04233 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CD74P04233 OR4K12P-201ENST00000406538 961 ntBASIC4.3□□□□□ -1.72
CD74P04233 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.3□□□□□ -1.72
CD74P04233 OR2AT2P-201ENST00000413438 905 ntBASIC4.3□□□□□ -1.72
CD74P04233 AC066692.1-201ENST00000421721 457 ntBASIC4.3□□□□□ -1.72
CD74P04233 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.3□□□□□ -1.72
CD74P04233 NMNAT1P2-201ENST00000435192 860 ntBASIC4.3□□□□□ -1.72
CD74P04233 MRPL48P1-201ENST00000445390 636 ntBASIC4.3□□□□□ -1.72
CD74P04233 NPM1P39-201ENST00000449818 867 ntBASIC4.3□□□□□ -1.72
CD74P04233 HSPE1P22-201ENST00000456856 327 ntBASIC4.3□□□□□ -1.72
CD74P04233 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.3□□□□□ -1.72
CD74P04233 RPL21P6-201ENST00000479171 504 ntBASIC4.3□□□□□ -1.72
CD74P04233 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.3□□□□□ -1.72
CD74P04233 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.3□□□□□ -1.72
CD74P04233 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.3□□□□□ -1.72
CD74P04233 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.3□□□□□ -1.72
CD74P04233 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.3□□□□□ -1.72
CD74P04233 AC092121.1-201ENST00000569452 202 ntBASIC4.3□□□□□ -1.72
CD74P04233 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CD74P04233 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.3□□□□□ -1.72
CD74P04233 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC4.3□□□□□ -1.72
CD74P04233 IMMP1LP1-201ENST00000605170 488 ntBASIC4.3□□□□□ -1.72
CD74P04233 AL008729.2-201ENST00000606393 473 ntBASIC4.3□□□□□ -1.72
CD74P04233 AL137246.1-201ENST00000607072 977 ntBASIC4.3□□□□□ -1.72
CD74P04233 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.3□□□□□ -1.72
CD74P04233 AC096586.2-201ENST00000610260 441 ntBASIC4.3□□□□□ -1.72
CD74P04233 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.3□□□□□ -1.72
CD74P04233 AC132068.1-201ENST00000623805 459 ntBASIC4.3□□□□□ -1.72
CD74P04233 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.3□□□□□ -1.72
CD74P04233 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.3□□□□□ -1.72
CD74P04233 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.3□□□□□ -1.72
CD74P04233 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.3□□□□□ -1.72
CD74P04233 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CD74P04233 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CD74P04233 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.3□□□□□ -1.72
CD74P04233 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CD74P04233 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.3□□□□□ -1.72
CD74P04233 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
CD74P04233 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.3□□□□□ -1.72
CD74P04233 Z95327.2-201ENST00000414579 1873 ntBASIC4.3□□□□□ -1.72
CD74P04233 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 2561.7 ms