Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TNFP01375 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TNFP01375 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
TNFP01375 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.89□□□□□ -1.63
TNFP01375 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TNFP01375 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
TNFP01375 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
TNFP01375 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
TNFP01375 HMGB3P7-201ENST00000400214 611 ntBASIC4.89□□□□□ -1.63
TNFP01375 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.89□□□□□ -1.63
TNFP01375 RPS27AP6-201ENST00000427962 448 ntBASIC4.89□□□□□ -1.63
TNFP01375 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.89□□□□□ -1.63
TNFP01375 RPS29P9-201ENST00000440360 171 ntBASIC4.89□□□□□ -1.63
TNFP01375 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.89□□□□□ -1.63
TNFP01375 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.89□□□□□ -1.63
TNFP01375 SLC25A18P1-201ENST00000449385 454 ntBASIC4.89□□□□□ -1.63
TNFP01375 HMGB1P4-201ENST00000455362 567 ntBASIC4.89□□□□□ -1.63
TNFP01375 AC002456.2-201ENST00000509356 380 ntBASIC4.89□□□□□ -1.63
TNFP01375 AC012339.2-201ENST00000523996 453 ntBASIC4.89□□□□□ -1.63
TNFP01375 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.89□□□□□ -1.63
TNFP01375 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.89□□□□□ -1.63
TNFP01375 CR383656.6-201ENST00000550518 394 ntBASIC4.89□□□□□ -1.63
TNFP01375 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.89□□□□□ -1.63
TNFP01375 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.89□□□□□ -1.63
TNFP01375 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.89□□□□□ -1.63
TNFP01375 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.89□□□□□ -1.63
TNFP01375 LSM1P2-201ENST00000604911 322 ntBASIC4.89□□□□□ -1.63
TNFP01375 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.89□□□□□ -1.63
TNFP01375 ECM1P2-201ENST00000503354 1577 ntBASIC4.89□□□□□ -1.63
TNFP01375 SMG1P7-201ENST00000565246 2704 ntBASIC4.89□□□□□ -1.63
TNFP01375 AC092451.3-201ENST00000625067 1343 ntBASIC4.89□□□□□ -1.63
TNFP01375 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
TNFP01375 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TNFP01375 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TNFP01375 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.89□□□□□ -1.63
TNFP01375 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.89□□□□□ -1.63
TNFP01375 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.88□□□□□ -1.63
TNFP01375 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TNFP01375 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TNFP01375 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
TNFP01375 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
TNFP01375 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.88□□□□□ -1.63
TNFP01375 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
TNFP01375 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TNFP01375 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
TNFP01375 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TNFP01375 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
TNFP01375 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC4.88□□□□□ -1.63
TNFP01375 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.88□□□□□ -1.63
TNFP01375 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.88□□□□□ -1.63
TNFP01375 AC007559.1-201ENST00000428736 355 ntBASIC4.88□□□□□ -1.63
TNFP01375 TXNP5-201ENST00000441043 315 ntBASIC4.88□□□□□ -1.63
TNFP01375 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.88□□□□□ -1.63
TNFP01375 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.88□□□□□ -1.63
TNFP01375 AL356390.1-201ENST00000455684 397 ntBASIC4.88□□□□□ -1.63
TNFP01375 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.88□□□□□ -1.63
TNFP01375 AC105420.1-201ENST00000504389 582 ntBASIC4.88□□□□□ -1.63
TNFP01375 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.88□□□□□ -1.63
TNFP01375 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.88□□□□□ -1.63
TNFP01375 AC016559.2-201ENST00000510759 359 ntBASIC4.88□□□□□ -1.63
TNFP01375 AL671862.1-201ENST00000515851 349 ntBASIC4.88□□□□□ -1.63
TNFP01375 RNA5SP228-201ENST00000516232 133 ntBASIC4.88□□□□□ -1.63
TNFP01375 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.88□□□□□ -1.63
TNFP01375 UBE2FP2-201ENST00000566646 462 ntBASIC4.88□□□□□ -1.63
TNFP01375 MIR3667-201ENST00000581025 74 ntBASIC4.88□□□□□ -1.63
TNFP01375 MIR4270-201ENST00000581799 70 ntBASIC4.88□□□□□ -1.63
TNFP01375 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.88□□□□□ -1.63
TNFP01375 AC020910.3-201ENST00000603701 874 ntBASIC4.88□□□□□ -1.63
TNFP01375 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.88□□□□□ -1.63
TNFP01375 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TNFP01375 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.88□□□□□ -1.63
TNFP01375 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
TNFP01375 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.88□□□□□ -1.63
TNFP01375 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TNFP01375 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
TNFP01375 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
TNFP01375 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.88□□□□□ -1.63
TNFP01375 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
TNFP01375 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.87□□□□□ -1.63
TNFP01375 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TNFP01375 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TNFP01375 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TNFP01375 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.87□□□□□ -1.63
TNFP01375 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
TNFP01375 SAMMSON-226ENST00000642089 1582 ntBASIC4.87□□□□□ -1.63
TNFP01375 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.87□□□□□ -1.63
TNFP01375 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TNFP01375 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.87□□□□□ -1.63
TNFP01375 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.87□□□□□ -1.63
TNFP01375 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
TNFP01375 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.87□□□□□ -1.63
TNFP01375 RN7SKP216-201ENST00000411050 312 ntBASIC4.87□□□□□ -1.63
TNFP01375 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.87□□□□□ -1.63
TNFP01375 GTF2IP5-201ENST00000414608 731 ntBASIC4.87□□□□□ -1.63
TNFP01375 AC117434.1-201ENST00000419971 836 ntBASIC4.87□□□□□ -1.63
TNFP01375 REREP1Y-201ENST00000422655 198 ntBASIC4.87□□□□□ -1.63
TNFP01375 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.87□□□□□ -1.63
TNFP01375 AC046176.1-201ENST00000435260 1170 ntBASIC4.87□□□□□ -1.63
TNFP01375 REREP2Y-201ENST00000439103 200 ntBASIC4.87□□□□□ -1.63
TNFP01375 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms