Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
USH2AO75445 AC090017.1-201ENST00000548612 1779 ntBASIC2.13□□□□□ -2.07
USH2AO75445 OR8B9P-202ENST00000642028 5216 ntBASIC2.13□□□□□ -2.07
USH2AO75445 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
USH2AO75445 MTND4LP2-201ENST00000502312 285 ntBASIC2.13□□□□□ -2.07
USH2AO75445 AC026403.1-201ENST00000518938 295 ntBASIC2.13□□□□□ -2.07
USH2AO75445 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC2.13□□□□□ -2.07
USH2AO75445 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC2.13□□□□□ -2.07
USH2AO75445 AC010653.1-201ENST00000571108 881 ntBASIC2.13□□□□□ -2.07
USH2AO75445 AC019322.1-201ENST00000571869 389 ntBASIC2.13□□□□□ -2.07
USH2AO75445 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC2.13□□□□□ -2.07
USH2AO75445 AC011815.3-201ENST00000624194 473 ntBASIC2.13□□□□□ -2.07
USH2AO75445 RLIMP1-201ENST00000339626 1680 ntBASIC2.13□□□□□ -2.07
USH2AO75445 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
USH2AO75445 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
USH2AO75445 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
USH2AO75445 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
USH2AO75445 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
USH2AO75445 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
USH2AO75445 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
USH2AO75445 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
USH2AO75445 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
USH2AO75445 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
USH2AO75445 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
USH2AO75445 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
USH2AO75445 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
USH2AO75445 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC2.13□□□□□ -2.07
USH2AO75445 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
USH2AO75445 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC2.13□□□□□ -2.07
USH2AO75445 RNA5SP283-201ENST00000365604 119 ntBASIC2.13□□□□□ -2.07
USH2AO75445 MTND4LP20-201ENST00000402379 270 ntBASIC2.13□□□□□ -2.07
USH2AO75445 RPS27AP11-201ENST00000402798 447 ntBASIC2.13□□□□□ -2.07
USH2AO75445 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC2.13□□□□□ -2.07
USH2AO75445 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC2.13□□□□□ -2.07
USH2AO75445 AC006994.1-201ENST00000438212 839 ntBASIC2.13□□□□□ -2.07
USH2AO75445 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC2.13□□□□□ -2.07
USH2AO75445 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
USH2AO75445 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC2.13□□□□□ -2.07
USH2AO75445 MYO15A-201ENST00000205890 11863 ntAPPRIS P2 TSL 5 BASIC2.13□□□□□ -2.07
USH2AO75445 MYO15A-217ENST00000615845 11860 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
USH2AO75445 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC2.13□□□□□ -2.07
USH2AO75445 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC2.13□□□□□ -2.07
USH2AO75445 AL929601.4-201ENST00000613011 1341 ntBASIC2.13□□□□□ -2.07
USH2AO75445 AC092451.3-201ENST00000625067 1343 ntBASIC2.13□□□□□ -2.07
USH2AO75445 AP003175.1-201ENST00000641383 6658 ntBASIC2.13□□□□□ -2.07
USH2AO75445 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
USH2AO75445 AC034229.2-201ENST00000566945 2508 ntBASIC2.13□□□□□ -2.07
USH2AO75445 ERVFRD-3-201ENST00000578561 1617 ntBASIC2.13□□□□□ -2.07
USH2AO75445 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
USH2AO75445 BAZ2A-201ENST00000379441 8831 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
USH2AO75445 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
USH2AO75445 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
USH2AO75445 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
USH2AO75445 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
USH2AO75445 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
USH2AO75445 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.13□□□□□ -2.07
USH2AO75445 ACTR3P2-201ENST00000439585 1257 ntBASIC2.13□□□□□ -2.07
USH2AO75445 HCG14-201ENST00000444986 413 ntTSL 2 BASIC2.13□□□□□ -2.07
USH2AO75445 AC091564.1-201ENST00000464563 479 ntBASIC2.13□□□□□ -2.07
USH2AO75445 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC2.13□□□□□ -2.07
USH2AO75445 ACTR3BP4-201ENST00000503033 1244 ntBASIC2.13□□□□□ -2.07
USH2AO75445 TRMT10BP1-201ENST00000519377 943 ntBASIC2.13□□□□□ -2.07
USH2AO75445 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC2.13□□□□□ -2.07
USH2AO75445 AC022726.1-201ENST00000587475 207 ntBASIC2.13□□□□□ -2.07
USH2AO75445 AC010680.3-201ENST00000604215 520 ntBASIC2.13□□□□□ -2.07
USH2AO75445 AC136601.2-201ENST00000604356 474 ntBASIC2.13□□□□□ -2.07
USH2AO75445 AC073137.1-201ENST00000605636 634 ntBASIC2.13□□□□□ -2.07
USH2AO75445 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC2.13□□□□□ -2.07
USH2AO75445 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC2.13□□□□□ -2.07
USH2AO75445 MIR8059-201ENST00000620427 81 ntBASIC2.13□□□□□ -2.07
USH2AO75445 PABPC1P8-201ENST00000452851 2086 ntBASIC2.13□□□□□ -2.07
USH2AO75445 CD109-202ENST00000422508 9221 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
USH2AO75445 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
USH2AO75445 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
USH2AO75445 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
USH2AO75445 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
USH2AO75445 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC2.13□□□□□ -2.07
USH2AO75445 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC2.13□□□□□ -2.07
USH2AO75445 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
USH2AO75445 ECM1P2-201ENST00000503354 1577 ntBASIC2.13□□□□□ -2.07
USH2AO75445 RN7SKP74-201ENST00000362849 309 ntBASIC2.13□□□□□ -2.07
USH2AO75445 RNA5SP366-201ENST00000365454 123 ntBASIC2.13□□□□□ -2.07
USH2AO75445 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC2.13□□□□□ -2.07
USH2AO75445 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC2.13□□□□□ -2.07
USH2AO75445 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC2.13□□□□□ -2.07
USH2AO75445 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC2.13□□□□□ -2.07
USH2AO75445 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC2.13□□□□□ -2.07
USH2AO75445 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
USH2AO75445 AC023632.4-201ENST00000517783 191 ntBASIC2.13□□□□□ -2.07
USH2AO75445 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.13□□□□□ -2.07
USH2AO75445 MIR4433B-201ENST00000581329 102 ntBASIC2.13□□□□□ -2.07
USH2AO75445 AC112230.1-201ENST00000604342 547 ntBASIC2.13□□□□□ -2.07
USH2AO75445 AC115621.1-201ENST00000604653 858 ntBASIC2.13□□□□□ -2.07
USH2AO75445 AC011626.1-201ENST00000604710 562 ntBASIC2.13□□□□□ -2.07
USH2AO75445 AC020634.1-201ENST00000608701 549 ntBASIC2.13□□□□□ -2.07
USH2AO75445 U6.105-201ENST00000637379 88 ntBASIC2.13□□□□□ -2.07
USH2AO75445 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC2.13□□□□□ -2.07
USH2AO75445 AP001029.2-203ENST00000589795 4910 ntBASIC2.13□□□□□ -2.07
USH2AO75445 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
USH2AO75445 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms