Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS4BO75351 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS4BO75351 ZNF849P-201ENST00000594711 1566 ntBASIC5.78□□□□□ -1.48
VPS4BO75351 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS4BO75351 Z82195.1-201ENST00000604558 398 ntBASIC5.78□□□□□ -1.48
VPS4BO75351 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS4BO75351 AC231759.1-201ENST00000616455 597 ntBASIC5.78□□□□□ -1.48
VPS4BO75351 AL445670.1-201ENST00000618889 801 ntBASIC5.78□□□□□ -1.48
VPS4BO75351 AC112694.2-201ENST00000623697 768 ntBASIC5.78□□□□□ -1.48
VPS4BO75351 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS4BO75351 OR8G3P-202ENST00000641572 1255 ntBASIC5.78□□□□□ -1.48
VPS4BO75351 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VPS4BO75351 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
VPS4BO75351 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VPS4BO75351 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS4BO75351 AC018717.1-201ENST00000457712 1505 ntBASIC5.78□□□□□ -1.48
VPS4BO75351 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
VPS4BO75351 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.78□□□□□ -1.48
VPS4BO75351 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VPS4BO75351 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VPS4BO75351 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
VPS4BO75351 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
VPS4BO75351 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
VPS4BO75351 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VPS4BO75351 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS4BO75351 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
VPS4BO75351 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS4BO75351 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS4BO75351 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS4BO75351 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
VPS4BO75351 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
VPS4BO75351 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS4BO75351 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
VPS4BO75351 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
VPS4BO75351 RN7SKP286-201ENST00000410894 299 ntBASIC5.77□□□□□ -1.49
VPS4BO75351 UBE2V1P11-201ENST00000411559 285 ntBASIC5.77□□□□□ -1.49
VPS4BO75351 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.77□□□□□ -1.49
VPS4BO75351 AL513325.1-201ENST00000417716 1034 ntBASIC5.77□□□□□ -1.49
VPS4BO75351 RPL35AP31-201ENST00000418340 337 ntBASIC5.77□□□□□ -1.49
VPS4BO75351 NMD3P2-201ENST00000421815 761 ntBASIC5.77□□□□□ -1.49
VPS4BO75351 AL121776.1-201ENST00000429337 372 ntBASIC5.77□□□□□ -1.49
VPS4BO75351 NDUFA5P10-201ENST00000432147 357 ntBASIC5.77□□□□□ -1.49
VPS4BO75351 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS4BO75351 AC096775.1-201ENST00000437724 448 ntBASIC5.77□□□□□ -1.49
VPS4BO75351 AL353662.1-201ENST00000439099 327 ntBASIC5.77□□□□□ -1.49
VPS4BO75351 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.77□□□□□ -1.49
VPS4BO75351 MTND6P5-201ENST00000448266 512 ntBASIC5.77□□□□□ -1.49
VPS4BO75351 AC004263.1-201ENST00000479327 332 ntBASIC5.77□□□□□ -1.49
VPS4BO75351 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.77□□□□□ -1.49
VPS4BO75351 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.77□□□□□ -1.49
VPS4BO75351 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.77□□□□□ -1.49
VPS4BO75351 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
VPS4BO75351 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.77□□□□□ -1.49
VPS4BO75351 RNA5SP340-201ENST00000517132 107 ntBASIC5.77□□□□□ -1.49
VPS4BO75351 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.77□□□□□ -1.49
VPS4BO75351 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.77□□□□□ -1.49
VPS4BO75351 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.77□□□□□ -1.49
VPS4BO75351 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.77□□□□□ -1.49
VPS4BO75351 AC027544.3-201ENST00000535082 757 ntBASIC5.77□□□□□ -1.49
VPS4BO75351 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.77□□□□□ -1.49
VPS4BO75351 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.77□□□□□ -1.49
VPS4BO75351 AC092121.1-201ENST00000569452 202 ntBASIC5.77□□□□□ -1.49
VPS4BO75351 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS4BO75351 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS4BO75351 AL451064.1-201ENST00000607718 471 ntBASIC5.77□□□□□ -1.49
VPS4BO75351 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.77□□□□□ -1.49
VPS4BO75351 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.77□□□□□ -1.49
VPS4BO75351 AC084782.3-201ENST00000612282 578 ntBASIC5.77□□□□□ -1.49
VPS4BO75351 PART1_2.1-201ENST00000612397 250 ntBASIC5.77□□□□□ -1.49
VPS4BO75351 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS4BO75351 MIR6730-201ENST00000622213 67 ntBASIC5.77□□□□□ -1.49
VPS4BO75351 AC105105.5-201ENST00000622635 1294 ntBASIC5.77□□□□□ -1.49
VPS4BO75351 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS4BO75351 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS4BO75351 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
VPS4BO75351 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VPS4BO75351 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.77□□□□□ -1.49
VPS4BO75351 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
VPS4BO75351 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.77□□□□□ -1.49
VPS4BO75351 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
VPS4BO75351 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS4BO75351 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS4BO75351 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
VPS4BO75351 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
VPS4BO75351 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS4BO75351 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.76□□□□□ -1.49
VPS4BO75351 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
VPS4BO75351 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VPS4BO75351 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.76□□□□□ -1.49
VPS4BO75351 AC022325.1-201ENST00000502748 2199 ntBASIC5.76□□□□□ -1.49
VPS4BO75351 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VPS4BO75351 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
VPS4BO75351 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
VPS4BO75351 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
VPS4BO75351 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VPS4BO75351 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
VPS4BO75351 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
VPS4BO75351 MIR143-201ENST00000385300 106 ntBASIC5.76□□□□□ -1.49
VPS4BO75351 RNU6-932P-201ENST00000391108 106 ntBASIC5.76□□□□□ -1.49
VPS4BO75351 AL603865.2-201ENST00000401679 213 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms