Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
LMX1BO60663 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.82□□□□□ -1.64
LMX1BO60663 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
LMX1BO60663 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.82□□□□□ -1.64
LMX1BO60663 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.82□□□□□ -1.64
LMX1BO60663 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.82□□□□□ -1.64
LMX1BO60663 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.82□□□□□ -1.64
LMX1BO60663 RNF10P1-201ENST00000418589 369 ntBASIC4.82□□□□□ -1.64
LMX1BO60663 AC006335.2-201ENST00000437993 330 ntBASIC4.82□□□□□ -1.64
LMX1BO60663 PTMAP6-201ENST00000439110 327 ntBASIC4.82□□□□□ -1.64
LMX1BO60663 AC005297.1-201ENST00000444765 862 ntBASIC4.82□□□□□ -1.64
LMX1BO60663 SUMO2P1-206ENST00000445436 284 ntBASIC4.82□□□□□ -1.64
LMX1BO60663 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.82□□□□□ -1.64
LMX1BO60663 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.82□□□□□ -1.64
LMX1BO60663 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.82□□□□□ -1.64
LMX1BO60663 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.82□□□□□ -1.64
LMX1BO60663 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.82□□□□□ -1.64
LMX1BO60663 RN7SL72P-201ENST00000460697 269 ntBASIC4.82□□□□□ -1.64
LMX1BO60663 RPS17P15-201ENST00000475609 349 ntBASIC4.82□□□□□ -1.64
LMX1BO60663 ATP5LP5-201ENST00000483050 299 ntBASIC4.82□□□□□ -1.64
LMX1BO60663 CR383656.1-201ENST00000484916 377 ntBASIC4.82□□□□□ -1.64
LMX1BO60663 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.82□□□□□ -1.64
LMX1BO60663 AC006499.3-201ENST00000506077 748 ntBASIC4.82□□□□□ -1.64
LMX1BO60663 AC108157.1-201ENST00000510511 539 ntBASIC4.82□□□□□ -1.64
LMX1BO60663 MTCO3P27-201ENST00000514397 196 ntBASIC4.82□□□□□ -1.64
LMX1BO60663 AC016550.3-201ENST00000515706 767 ntBASIC4.82□□□□□ -1.64
LMX1BO60663 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.82□□□□□ -1.64
LMX1BO60663 RNU6-943P-201ENST00000516960 98 ntBASIC4.82□□□□□ -1.64
LMX1BO60663 RNU6-334P-201ENST00000517072 102 ntBASIC4.82□□□□□ -1.64
LMX1BO60663 SNORA76.2-201ENST00000517095 137 ntBASIC4.82□□□□□ -1.64
LMX1BO60663 C1DP5-201ENST00000525775 383 ntBASIC4.82□□□□□ -1.64
LMX1BO60663 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.82□□□□□ -1.64
LMX1BO60663 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
LMX1BO60663 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.82□□□□□ -1.64
LMX1BO60663 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.82□□□□□ -1.64
LMX1BO60663 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC4.82□□□□□ -1.64
LMX1BO60663 MIR4700-201ENST00000578311 74 ntBASIC4.82□□□□□ -1.64
LMX1BO60663 AC125494.2-201ENST00000602431 657 ntBASIC4.82□□□□□ -1.64
LMX1BO60663 AC068620.3-201ENST00000602749 560 ntBASIC4.82□□□□□ -1.64
LMX1BO60663 AC025016.1-201ENST00000616746 682 ntBASIC4.82□□□□□ -1.64
LMX1BO60663 AC008115.4-201ENST00000619780 775 ntBASIC4.82□□□□□ -1.64
LMX1BO60663 AC004777.1-201ENST00000624317 287 ntBASIC4.82□□□□□ -1.64
LMX1BO60663 AL390318.1-201ENST00000624564 687 ntBASIC4.82□□□□□ -1.64
LMX1BO60663 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.82□□□□□ -1.64
LMX1BO60663 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.82□□□□□ -1.64
LMX1BO60663 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
LMX1BO60663 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LMX1BO60663 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LMX1BO60663 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LMX1BO60663 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.82□□□□□ -1.64
LMX1BO60663 AC083837.1-201ENST00000565297 2994 ntBASIC4.82□□□□□ -1.64
LMX1BO60663 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
LMX1BO60663 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.81□□□□□ -1.64
LMX1BO60663 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LMX1BO60663 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LMX1BO60663 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LMX1BO60663 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
LMX1BO60663 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
LMX1BO60663 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
LMX1BO60663 AC007342.5-201ENST00000571340 2142 ntBASIC4.81□□□□□ -1.64
LMX1BO60663 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LMX1BO60663 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LMX1BO60663 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
LMX1BO60663 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LMX1BO60663 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LMX1BO60663 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.81□□□□□ -1.64
LMX1BO60663 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LMX1BO60663 AC092681.1-201ENST00000297369 291 ntBASIC4.81□□□□□ -1.64
LMX1BO60663 MIR133A2-201ENST00000347538 102 ntBASIC4.81□□□□□ -1.64
LMX1BO60663 RNU6-171P-201ENST00000384354 107 ntBASIC4.81□□□□□ -1.64
LMX1BO60663 AF228730.1-201ENST00000397972 663 ntBASIC4.81□□□□□ -1.64
LMX1BO60663 AL589994.1-201ENST00000404962 340 ntBASIC4.81□□□□□ -1.64
LMX1BO60663 AL009179.1-201ENST00000406085 265 ntBASIC4.81□□□□□ -1.64
LMX1BO60663 RMRPP5-201ENST00000411156 267 ntBASIC4.81□□□□□ -1.64
LMX1BO60663 DPPA2P3-201ENST00000411853 655 ntBASIC4.81□□□□□ -1.64
LMX1BO60663 GTF2IP5-201ENST00000414608 731 ntBASIC4.81□□□□□ -1.64
LMX1BO60663 AC079809.1-201ENST00000415468 276 ntBASIC4.81□□□□□ -1.64
LMX1BO60663 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
LMX1BO60663 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.81□□□□□ -1.64
LMX1BO60663 MRPS21P2-201ENST00000424704 264 ntBASIC4.81□□□□□ -1.64
LMX1BO60663 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.81□□□□□ -1.64
LMX1BO60663 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.81□□□□□ -1.64
LMX1BO60663 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.81□□□□□ -1.64
LMX1BO60663 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LMX1BO60663 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.81□□□□□ -1.64
LMX1BO60663 FMO7P-201ENST00000436045 768 ntBASIC4.81□□□□□ -1.64
LMX1BO60663 AC012075.1-201ENST00000436549 580 ntBASIC4.81□□□□□ -1.64
LMX1BO60663 AL450996.1-201ENST00000445574 1202 ntBASIC4.81□□□□□ -1.64
LMX1BO60663 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.81□□□□□ -1.64
LMX1BO60663 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.81□□□□□ -1.64
LMX1BO60663 CABYRP1-201ENST00000465493 1045 ntBASIC4.81□□□□□ -1.64
LMX1BO60663 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.81□□□□□ -1.64
LMX1BO60663 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.81□□□□□ -1.64
LMX1BO60663 COPS8P2-201ENST00000473228 627 ntBASIC4.81□□□□□ -1.64
LMX1BO60663 RPL7P39-201ENST00000481157 744 ntBASIC4.81□□□□□ -1.64
LMX1BO60663 RPS3AP15-201ENST00000483874 781 ntBASIC4.81□□□□□ -1.64
LMX1BO60663 AC105233.1-201ENST00000498840 781 ntBASIC4.81□□□□□ -1.64
LMX1BO60663 PRELID3BP6-201ENST00000503839 571 ntBASIC4.81□□□□□ -1.64
LMX1BO60663 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.81□□□□□ -1.64
LMX1BO60663 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms