Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AL161912.4-201ENST00000623889 2468 ntBASIC5.74□□□□□ -1.49
PHGDHO43175 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.74□□□□□ -1.49
PHGDHO43175 HSPD1P9-201ENST00000420325 1636 ntBASIC5.74□□□□□ -1.49
PHGDHO43175 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.74□□□□□ -1.49
PHGDHO43175 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PHGDHO43175 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
PHGDHO43175 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
PHGDHO43175 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.74□□□□□ -1.49
PHGDHO43175 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PHGDHO43175 ENSAP3-201ENST00000312710 333 ntBASIC5.74□□□□□ -1.49
PHGDHO43175 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
PHGDHO43175 RNA5SP232-201ENST00000364144 119 ntBASIC5.74□□□□□ -1.49
PHGDHO43175 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
PHGDHO43175 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.74□□□□□ -1.49
PHGDHO43175 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.74□□□□□ -1.49
PHGDHO43175 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.74□□□□□ -1.49
PHGDHO43175 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.74□□□□□ -1.49
PHGDHO43175 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.74□□□□□ -1.49
PHGDHO43175 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PHGDHO43175 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.74□□□□□ -1.49
PHGDHO43175 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.74□□□□□ -1.49
PHGDHO43175 CR769776.1-201ENST00000441254 787 ntBASIC5.74□□□□□ -1.49
PHGDHO43175 ARL5AP2-201ENST00000444698 533 ntBASIC5.74□□□□□ -1.49
PHGDHO43175 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PHGDHO43175 AC097463.1-201ENST00000447288 481 ntBASIC5.74□□□□□ -1.49
PHGDHO43175 Z73417.1-201ENST00000447373 778 ntBASIC5.74□□□□□ -1.49
PHGDHO43175 RPL31P44-201ENST00000447680 377 ntBASIC5.74□□□□□ -1.49
PHGDHO43175 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.74□□□□□ -1.49
PHGDHO43175 GEMIN2P1-201ENST00000454246 752 ntBASIC5.74□□□□□ -1.49
PHGDHO43175 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.74□□□□□ -1.49
PHGDHO43175 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.74□□□□□ -1.49
PHGDHO43175 AC018797.1-201ENST00000510791 255 ntBASIC5.74□□□□□ -1.49
PHGDHO43175 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.74□□□□□ -1.49
PHGDHO43175 AC074087.1-201ENST00000512059 724 ntBASIC5.74□□□□□ -1.49
PHGDHO43175 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.74□□□□□ -1.49
PHGDHO43175 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.74□□□□□ -1.49
PHGDHO43175 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.74□□□□□ -1.49
PHGDHO43175 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.74□□□□□ -1.49
PHGDHO43175 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC5.74□□□□□ -1.49
PHGDHO43175 CYP2C60P-201ENST00000566088 139 ntBASIC5.74□□□□□ -1.49
PHGDHO43175 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.74□□□□□ -1.49
PHGDHO43175 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.74□□□□□ -1.49
PHGDHO43175 AC138207.8-204ENST00000579588 527 ntBASIC5.74□□□□□ -1.49
PHGDHO43175 MIR4502-201ENST00000580432 81 ntBASIC5.74□□□□□ -1.49
PHGDHO43175 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PHGDHO43175 AC125494.3-201ENST00000602759 455 ntBASIC5.74□□□□□ -1.49
PHGDHO43175 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.74□□□□□ -1.49
PHGDHO43175 AC002487.1-201ENST00000604565 994 ntBASIC5.74□□□□□ -1.49
PHGDHO43175 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PHGDHO43175 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.74□□□□□ -1.49
PHGDHO43175 AP000484.1-201ENST00000620067 1252 ntBASIC5.74□□□□□ -1.49
PHGDHO43175 AC011330.2-201ENST00000621680 635 ntBASIC5.74□□□□□ -1.49
PHGDHO43175 AC024595.1-201ENST00000623088 387 ntBASIC5.74□□□□□ -1.49
PHGDHO43175 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.74□□□□□ -1.49
PHGDHO43175 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.74□□□□□ -1.49
PHGDHO43175 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.74□□□□□ -1.49
PHGDHO43175 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
PHGDHO43175 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PHGDHO43175 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.74□□□□□ -1.49
PHGDHO43175 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PHGDHO43175 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
PHGDHO43175 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
PHGDHO43175 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.74□□□□□ -1.49
PHGDHO43175 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.74□□□□□ -1.49
PHGDHO43175 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PHGDHO43175 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
PHGDHO43175 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PHGDHO43175 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
PHGDHO43175 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PHGDHO43175 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PHGDHO43175 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PHGDHO43175 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.73□□□□□ -1.49
PHGDHO43175 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.73□□□□□ -1.49
PHGDHO43175 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
PHGDHO43175 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
PHGDHO43175 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
PHGDHO43175 TMSB4XP2-201ENST00000335179 210 ntBASIC5.73□□□□□ -1.49
PHGDHO43175 RNU6-543P-201ENST00000362576 108 ntBASIC5.73□□□□□ -1.49
PHGDHO43175 SNORA62.2-201ENST00000364672 152 ntBASIC5.73□□□□□ -1.49
PHGDHO43175 SNORD116-12-201ENST00000384468 92 ntBASIC5.73□□□□□ -1.49
PHGDHO43175 RN7SKP86-201ENST00000410454 332 ntBASIC5.73□□□□□ -1.49
PHGDHO43175 RNU4-22P-201ENST00000411058 166 ntBASIC5.73□□□□□ -1.49
PHGDHO43175 TAF13P2-201ENST00000416876 286 ntBASIC5.73□□□□□ -1.49
PHGDHO43175 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.73□□□□□ -1.49
PHGDHO43175 VTI1BP4-201ENST00000427516 527 ntBASIC5.73□□□□□ -1.49
PHGDHO43175 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.73□□□□□ -1.49
PHGDHO43175 YWHAEP5-201ENST00000431545 765 ntBASIC5.73□□□□□ -1.49
PHGDHO43175 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.73□□□□□ -1.49
PHGDHO43175 AC099670.2-201ENST00000435130 321 ntBASIC5.73□□□□□ -1.49
PHGDHO43175 PNKDP1-201ENST00000435914 430 ntBASIC5.73□□□□□ -1.49
PHGDHO43175 GAPDHP48-201ENST00000436626 961 ntBASIC5.73□□□□□ -1.49
PHGDHO43175 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PHGDHO43175 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.73□□□□□ -1.49
PHGDHO43175 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.73□□□□□ -1.49
PHGDHO43175 RPS23P9-201ENST00000448848 438 ntBASIC5.73□□□□□ -1.49
PHGDHO43175 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.73□□□□□ -1.49
PHGDHO43175 AC005077.1-201ENST00000449226 375 ntBASIC5.73□□□□□ -1.49
PHGDHO43175 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.73□□□□□ -1.49
PHGDHO43175 MTCO2P6-201ENST00000463134 685 ntBASIC5.73□□□□□ -1.49
PHGDHO43175 PSAT1P4-201ENST00000466500 526 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms