Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6.25□□□□□ -1.41
RGPD3A6NKT7 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.25□□□□□ -1.41
RGPD3A6NKT7 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC6.25□□□□□ -1.41
RGPD3A6NKT7 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC6.25□□□□□ -1.41
RGPD3A6NKT7 MIR4444-1-201ENST00000581696 74 ntBASIC6.25□□□□□ -1.41
RGPD3A6NKT7 MIR4444-2-201ENST00000584390 74 ntBASIC6.25□□□□□ -1.41
RGPD3A6NKT7 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.25□□□□□ -1.41
RGPD3A6NKT7 MIR6839-201ENST00000620425 113 ntBASIC6.25□□□□□ -1.41
RGPD3A6NKT7 AC067931.1-201ENST00000624190 671 ntBASIC6.25□□□□□ -1.41
RGPD3A6NKT7 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
RGPD3A6NKT7 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RGPD3A6NKT7 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.25□□□□□ -1.41
RGPD3A6NKT7 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RGPD3A6NKT7 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
RGPD3A6NKT7 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RGPD3A6NKT7 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RGPD3A6NKT7 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.24□□□□□ -1.41
RGPD3A6NKT7 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
RGPD3A6NKT7 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RGPD3A6NKT7 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
RGPD3A6NKT7 ZNF969P-201ENST00000510345 2341 ntBASIC6.24□□□□□ -1.41
RGPD3A6NKT7 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RGPD3A6NKT7 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
RGPD3A6NKT7 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.24□□□□□ -1.41
RGPD3A6NKT7 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
RGPD3A6NKT7 RNA5SP317-201ENST00000410176 116 ntBASIC6.24□□□□□ -1.41
RGPD3A6NKT7 RNA5SP311-201ENST00000411290 116 ntBASIC6.24□□□□□ -1.41
RGPD3A6NKT7 RPS12P10-201ENST00000427031 377 ntBASIC6.24□□□□□ -1.41
RGPD3A6NKT7 RPL34P6-201ENST00000432390 345 ntBASIC6.24□□□□□ -1.41
RGPD3A6NKT7 RRM2P4-201ENST00000441721 562 ntBASIC6.24□□□□□ -1.41
RGPD3A6NKT7 PSAT1P4-201ENST00000466500 526 ntBASIC6.24□□□□□ -1.41
RGPD3A6NKT7 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.24□□□□□ -1.41
RGPD3A6NKT7 RNA5SP315-201ENST00000516340 116 ntBASIC6.24□□□□□ -1.41
RGPD3A6NKT7 RNA5SP312-201ENST00000517068 116 ntBASIC6.24□□□□□ -1.41
RGPD3A6NKT7 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC6.24□□□□□ -1.41
RGPD3A6NKT7 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC6.24□□□□□ -1.41
RGPD3A6NKT7 AC053481.3-201ENST00000577881 843 ntBASIC6.24□□□□□ -1.41
RGPD3A6NKT7 PRELID3BP3-201ENST00000584963 545 ntBASIC6.24□□□□□ -1.41
RGPD3A6NKT7 SNX18P1Y-201ENST00000616231 511 ntBASIC6.24□□□□□ -1.41
RGPD3A6NKT7 AC112200.1-201ENST00000625015 234 ntBASIC6.24□□□□□ -1.41
RGPD3A6NKT7 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RGPD3A6NKT7 CYP1D1P-201ENST00000416662 1433 ntBASIC6.24□□□□□ -1.41
RGPD3A6NKT7 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RGPD3A6NKT7 AC017104.4-201ENST00000636283 1592 ntBASIC6.24□□□□□ -1.41
RGPD3A6NKT7 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RGPD3A6NKT7 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RGPD3A6NKT7 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
RGPD3A6NKT7 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RGPD3A6NKT7 RNU6ATAC5P-201ENST00000388104 126 ntBASIC6.23□□□□□ -1.41
RGPD3A6NKT7 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC6.23□□□□□ -1.41
RGPD3A6NKT7 RPS3AP54-201ENST00000435535 734 ntBASIC6.23□□□□□ -1.41
RGPD3A6NKT7 AC097523.2-201ENST00000435551 652 ntBASIC6.23□□□□□ -1.41
RGPD3A6NKT7 YWHAZP2-201ENST00000440317 728 ntBASIC6.23□□□□□ -1.41
RGPD3A6NKT7 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC6.23□□□□□ -1.41
RGPD3A6NKT7 TAAR4P-201ENST00000454843 1039 ntBASIC6.23□□□□□ -1.41
RGPD3A6NKT7 RNU6ATAC28P-201ENST00000459249 118 ntBASIC6.23□□□□□ -1.41
RGPD3A6NKT7 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC6.23□□□□□ -1.41
RGPD3A6NKT7 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.23□□□□□ -1.41
RGPD3A6NKT7 SEPT10P1-201ENST00000517342 1162 ntBASIC6.23□□□□□ -1.41
RGPD3A6NKT7 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC6.23□□□□□ -1.41
RGPD3A6NKT7 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.23□□□□□ -1.41
RGPD3A6NKT7 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.23□□□□□ -1.41
RGPD3A6NKT7 AL352984.2-202ENST00000613699 155 ntBASIC6.23□□□□□ -1.41
RGPD3A6NKT7 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RGPD3A6NKT7 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RGPD3A6NKT7 AC073342.2-201ENST00000595842 1800 ntBASIC6.23□□□□□ -1.41
RGPD3A6NKT7 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
RGPD3A6NKT7 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
RGPD3A6NKT7 RAD17P1-201ENST00000418130 2042 ntBASIC6.23□□□□□ -1.41
RGPD3A6NKT7 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
RGPD3A6NKT7 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
RGPD3A6NKT7 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RGPD3A6NKT7 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RGPD3A6NKT7 PPIAP31-201ENST00000405422 495 ntBASIC6.23□□□□□ -1.41
RGPD3A6NKT7 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.23□□□□□ -1.41
RGPD3A6NKT7 TBCAP2-201ENST00000416175 326 ntBASIC6.23□□□□□ -1.41
RGPD3A6NKT7 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
RGPD3A6NKT7 PHBP16-201ENST00000446318 950 ntBASIC6.23□□□□□ -1.41
RGPD3A6NKT7 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC6.23□□□□□ -1.41
RGPD3A6NKT7 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC6.23□□□□□ -1.41
RGPD3A6NKT7 RPS12P31-201ENST00000491419 398 ntBASIC6.23□□□□□ -1.41
RGPD3A6NKT7 AC106806.2-201ENST00000509365 500 ntBASIC6.23□□□□□ -1.41
RGPD3A6NKT7 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RGPD3A6NKT7 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
RGPD3A6NKT7 AL049839.1-201ENST00000556151 657 ntBASIC6.23□□□□□ -1.41
RGPD3A6NKT7 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC6.23□□□□□ -1.41
RGPD3A6NKT7 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.23□□□□□ -1.41
RGPD3A6NKT7 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC6.23□□□□□ -1.41
RGPD3A6NKT7 AC090948.1-201ENST00000607464 549 ntBASIC6.23□□□□□ -1.41
RGPD3A6NKT7 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.23□□□□□ -1.41
RGPD3A6NKT7 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RGPD3A6NKT7 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.22□□□□□ -1.41
RGPD3A6NKT7 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RGPD3A6NKT7 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RGPD3A6NKT7 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
RGPD3A6NKT7 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RGPD3A6NKT7 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RGPD3A6NKT7 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
RGPD3A6NKT7 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC6.22□□□□□ -1.41
RGPD3A6NKT7 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms