Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 ABCC13-202ENST00000463099 3842 ntBASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 OR9G4-201ENST00000302957 984 ntBASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 RNU6-354P-201ENST00000383862 107 ntBASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 RNU6-610P-201ENST00000384264 107 ntBASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 SNORA5.1-201ENST00000384275 131 ntBASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 RPL22P22-201ENST00000395439 379 ntBASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 ZNF602P-201ENST00000405929 924 ntBASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 HIGD1AP15-201ENST00000416198 280 ntBASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 MTND2P5-201ENST00000432656 1006 ntBASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 RPL19P16-201ENST00000433839 588 ntBASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 AC006994.1-201ENST00000438212 839 ntBASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 MTCYBP31-201ENST00000438855 1122 ntBASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 EIF2S2P2-201ENST00000447161 982 ntBASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 YWHAEP1-201ENST00000453697 763 ntBASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 RPS17P11-201ENST00000474297 293 ntBASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 RN7SL814P-201ENST00000487715 300 ntBASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 RPS24P16-201ENST00000497294 392 ntBASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 YWHABP2-201ENST00000540201 713 ntBASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 AC025918.2-201ENST00000558683 763 ntBASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 RBM22P1-201ENST00000578589 1214 ntBASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 FAM72A-208ENST00000607379 1139 ntBASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 MIR6839-201ENST00000620425 113 ntBASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.62□□□□□ -1.51
TCRBV5S1A1TA0A578 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 RN7SKP69-201ENST00000365390 305 ntBASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 RNU6-298P-201ENST00000390888 96 ntBASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 SNORA17A-201ENST00000391185 133 ntBASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 OOSP1-201ENST00000398992 1270 ntBASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 MTCO2P31-201ENST00000402702 684 ntBASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 HMGB3P19-201ENST00000403971 560 ntBASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 DSTNP5-201ENST00000427921 523 ntBASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 AC092447.2-201ENST00000435487 669 ntBASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 RPL23AP23-201ENST00000452590 471 ntBASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 AC100832.1-201ENST00000471945 383 ntBASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 AC008410.1-201ENST00000483777 339 ntBASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.61□□□□□ -1.51
TCRBV5S1A1TA0A578 AC098976.1-201ENST00000513014 541 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms