Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC006210.2-201ENST00000367074 1545 ntBASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 AC110792.3-201ENST00000595906 1614 ntBASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 RNU4-2-201ENST00000365668 141 ntBASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 MIR589-201ENST00000385238 99 ntBASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 OR6D1P-201ENST00000436165 939 ntBASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 NDUFS5P5-201ENST00000437256 321 ntBASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 RPL31P20-201ENST00000449593 360 ntBASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 AP000547.1-201ENST00000454360 617 ntBASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 AL133244.1-201ENST00000456007 258 ntBASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 ACA64.1-201ENST00000459171 127 ntBASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 GYG1P1-201ENST00000460864 698 ntBASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 AC068228.1-201ENST00000461723 211 ntBASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 AC037198.2-201ENST00000478845 733 ntBASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 RPL7P40-201ENST00000481703 745 ntBASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 AC091874.2-201ENST00000505889 720 ntBASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 GUSBP9-201ENST00000510138 584 ntBASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 TCP11X3P-202ENST00000514289 1254 ntBASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 RNA5SP303-201ENST00000516192 130 ntBASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 RNA5SP340-201ENST00000517132 107 ntBASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 OR4A41P-201ENST00000533053 928 ntBASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 AC020915.5-201ENST00000596836 964 ntBASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 SNX6P1-201ENST00000601728 1224 ntBASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 AL162431.4-201ENST00000604674 411 ntBASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 MIR6823-201ENST00000622118 61 ntBASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 AL592182.3-201ENST00000642132 3304 ntBASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 AC007342.9-201ENST00000623877 1385 ntBASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 AC104966.1-201ENST00000467010 1464 ntBASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 DDX18P3-201ENST00000404856 2007 ntBASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 AC022306.1-201ENST00000560489 1562 ntBASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 RNU6-1251P-201ENST00000364502 107 ntBASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 AC073136.2-201ENST00000417282 849 ntBASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 AJ239321.1-201ENST00000424255 564 ntBASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 AC009238.2-201ENST00000431026 355 ntBASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 RPL12P49-201ENST00000441100 121 ntBASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 AC093166.3-201ENST00000448785 303 ntBASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 NPM1P39-201ENST00000449818 867 ntBASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 VDAC2P4-201ENST00000452925 711 ntBASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 STRADBP1-201ENST00000478954 1281 ntBASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 AC073073.1-201ENST00000493920 463 ntBASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 ATG10-AS1-201ENST00000504846 648 ntBASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 HMGB1P44-201ENST00000508597 572 ntBASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 RNU6-615P-201ENST00000516065 106 ntBASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 RNU2-45P-201ENST00000516068 187 ntBASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 SNORA70.20-201ENST00000516848 126 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms