Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 AC099340.1-201ENST00000475247 599 ntBASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 FGF7P4-201ENST00000509595 295 ntBASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 AC022483.1-201ENST00000514020 567 ntBASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 HIGD1AP18-201ENST00000520730 278 ntBASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 AC005363.1-201ENST00000530779 351 ntBASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 AP002453.2-201ENST00000533503 320 ntBASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 AC124891.1-201ENST00000536322 519 ntBASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 AC093027.1-201ENST00000546698 429 ntBASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 AC020661.2-201ENST00000560114 134 ntBASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 AC012146.2-201ENST00000576545 416 ntBASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 PPIAP14-201ENST00000577627 496 ntBASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 7SK.7-201ENST00000603504 247 ntBASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 AL009028.1-201ENST00000604895 802 ntBASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 HNRNPA3P9-201ENST00000604913 979 ntBASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 AC098614.4-201ENST00000607601 462 ntBASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 SFTPD-AS1-201ENST00000608229 5001 ntBASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 OR1L1-202ENST00000373686 1083 ntBASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 RPL21P108-201ENST00000413857 481 ntBASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 Z99497.1-201ENST00000421282 135 ntBASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 HIGD1AP12-201ENST00000427832 281 ntBASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 CNOT7P1-201ENST00000429006 852 ntBASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 ZYG11AP1-201ENST00000430329 837 ntBASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 AC005539.1-201ENST00000443768 1479 ntBASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 AC098824.1-201ENST00000453565 980 ntBASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 RPL34P34-201ENST00000465389 354 ntBASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 AC104339.1-201ENST00000465478 348 ntBASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 RPL12P7-201ENST00000493832 494 ntBASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 AC106822.1-201ENST00000502647 526 ntBASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 AC021146.2-201ENST00000504736 556 ntBASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 RN7SKP98-201ENST00000517070 156 ntBASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 BUD31P1-201ENST00000521828 359 ntBASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 AC015818.6-201ENST00000584274 634 ntBASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 AC136443.5-201ENST00000603741 370 ntBASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 AC111152.1-202ENST00000635848 339 ntBASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 AC027559.1-201ENST00000636288 271 ntBASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 AC112243.1-201ENST00000623949 3851 ntBASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC8.67□□□□□ -1.02
PDZRN3Q9UPQ7 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 UG0898H09-202ENST00000623646 7040 ntBASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PDZRN3Q9UPQ7 RNY4P14-201ENST00000363656 96 ntBASIC8.66□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms