Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC233699.1-201ENST00000569955 1168 ntBASIC6.31□□□□□ -1.4
SCN11AQ9UI33 AL360012.1-201ENST00000602813 131 ntBASIC6.31□□□□□ -1.4
SCN11AQ9UI33 MIR6853-201ENST00000619642 74 ntBASIC6.31□□□□□ -1.4
SCN11AQ9UI33 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
SCN11AQ9UI33 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SCN11AQ9UI33 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.31□□□□□ -1.4
SCN11AQ9UI33 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SCN11AQ9UI33 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC6.31□□□□□ -1.4
SCN11AQ9UI33 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SCN11AQ9UI33 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
SCN11AQ9UI33 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
SCN11AQ9UI33 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SCN11AQ9UI33 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SCN11AQ9UI33 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
SCN11AQ9UI33 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SCN11AQ9UI33 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC6.31□□□□□ -1.4
SCN11AQ9UI33 TLK1P1-201ENST00000456760 2440 ntBASIC6.31□□□□□ -1.4
SCN11AQ9UI33 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SCN11AQ9UI33 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SCN11AQ9UI33 RN7SKP27-201ENST00000410684 333 ntBASIC6.31□□□□□ -1.4
SCN11AQ9UI33 ATG4AP1-201ENST00000416893 538 ntBASIC6.31□□□□□ -1.4
SCN11AQ9UI33 AC004690.1-201ENST00000418216 328 ntBASIC6.31□□□□□ -1.4
SCN11AQ9UI33 CHIAP3-201ENST00000423668 1133 ntBASIC6.31□□□□□ -1.4
SCN11AQ9UI33 COX6CP13-201ENST00000428703 226 ntBASIC6.31□□□□□ -1.4
SCN11AQ9UI33 AC068287.1-201ENST00000430283 295 ntBASIC6.31□□□□□ -1.4
SCN11AQ9UI33 AC012512.1-201ENST00000446594 718 ntBASIC6.31□□□□□ -1.4
SCN11AQ9UI33 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC6.31□□□□□ -1.4
SCN11AQ9UI33 HNRNPRP2-201ENST00000528421 743 ntBASIC6.31□□□□□ -1.4
SCN11AQ9UI33 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC6.31□□□□□ -1.4
SCN11AQ9UI33 AP000919.1-201ENST00000582850 985 ntBASIC6.31□□□□□ -1.4
SCN11AQ9UI33 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SCN11AQ9UI33 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
SCN11AQ9UI33 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SCN11AQ9UI33 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SCN11AQ9UI33 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.31□□□□□ -1.4
SCN11AQ9UI33 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
SCN11AQ9UI33 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC6.3□□□□□ -1.4
SCN11AQ9UI33 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SCN11AQ9UI33 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SCN11AQ9UI33 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SCN11AQ9UI33 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SCN11AQ9UI33 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
SCN11AQ9UI33 SNORD113.2-201ENST00000364166 89 ntBASIC6.3□□□□□ -1.4
SCN11AQ9UI33 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SCN11AQ9UI33 MRPS21P9-201ENST00000571150 257 ntBASIC6.3□□□□□ -1.4
SCN11AQ9UI33 SS18L2P2-201ENST00000583960 235 ntBASIC6.3□□□□□ -1.4
SCN11AQ9UI33 AC008782.1-201ENST00000603386 430 ntBASIC6.3□□□□□ -1.4
SCN11AQ9UI33 AC007497.1-201ENST00000610421 561 ntBASIC6.3□□□□□ -1.4
SCN11AQ9UI33 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SCN11AQ9UI33 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC6.3□□□□□ -1.4
SCN11AQ9UI33 SNX18P3-202ENST00000565670 1750 ntBASIC6.29□□□□□ -1.4
SCN11AQ9UI33 AC133552.1-201ENST00000569988 4007 ntBASIC6.29□□□□□ -1.4
SCN11AQ9UI33 AL031123.3-201ENST00000623345 1837 ntBASIC6.29□□□□□ -1.4
SCN11AQ9UI33 AC239367.2-201ENST00000447309 705 ntBASIC6.29□□□□□ -1.4
SCN11AQ9UI33 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.29□□□□□ -1.4
SCN11AQ9UI33 OR52E3P-201ENST00000452083 936 ntBASIC6.29□□□□□ -1.4
SCN11AQ9UI33 NIP7P2-201ENST00000485801 544 ntBASIC6.29□□□□□ -1.4
SCN11AQ9UI33 MIR4420-201ENST00000583944 77 ntBASIC6.29□□□□□ -1.4
SCN11AQ9UI33 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC6.29□□□□□ -1.4
SCN11AQ9UI33 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SCN11AQ9UI33 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC6.29□□□□□ -1.4
SCN11AQ9UI33 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.29□□□□□ -1.4
SCN11AQ9UI33 ZFRP1-201ENST00000457579 2970 ntBASIC6.29□□□□□ -1.4
SCN11AQ9UI33 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.29□□□□□ -1.4
SCN11AQ9UI33 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SCN11AQ9UI33 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SCN11AQ9UI33 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
SCN11AQ9UI33 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
SCN11AQ9UI33 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SCN11AQ9UI33 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
SCN11AQ9UI33 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SCN11AQ9UI33 RPL7P57-201ENST00000423238 740 ntBASIC6.29□□□□□ -1.4
SCN11AQ9UI33 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6.29□□□□□ -1.4
SCN11AQ9UI33 CEACAMP6-201ENST00000452007 574 ntBASIC6.29□□□□□ -1.4
SCN11AQ9UI33 SNORA70.11-201ENST00000515987 138 ntBASIC6.29□□□□□ -1.4
SCN11AQ9UI33 SNORA70.13-201ENST00000516116 138 ntBASIC6.29□□□□□ -1.4
SCN11AQ9UI33 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.29□□□□□ -1.4
SCN11AQ9UI33 AC034205.1-201ENST00000520621 638 ntBASIC6.29□□□□□ -1.4
SCN11AQ9UI33 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC6.29□□□□□ -1.4
SCN11AQ9UI33 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC6.29□□□□□ -1.4
SCN11AQ9UI33 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.29□□□□□ -1.4
SCN11AQ9UI33 AL133338.2-201ENST00000604292 736 ntBASIC6.29□□□□□ -1.4
SCN11AQ9UI33 AL034374.2-201ENST00000605281 548 ntBASIC6.29□□□□□ -1.4
SCN11AQ9UI33 FAM27B-201ENST00000610601 213 ntBASIC6.29□□□□□ -1.4
SCN11AQ9UI33 AL121873.1-201ENST00000616013 524 ntBASIC6.29□□□□□ -1.4
SCN11AQ9UI33 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SCN11AQ9UI33 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.29□□□□□ -1.4
SCN11AQ9UI33 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.28□□□□□ -1.4
SCN11AQ9UI33 AL137058.3-201ENST00000624531 3099 ntBASIC6.28□□□□□ -1.4
SCN11AQ9UI33 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SCN11AQ9UI33 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SCN11AQ9UI33 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC6.28□□□□□ -1.4
SCN11AQ9UI33 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SCN11AQ9UI33 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SCN11AQ9UI33 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SCN11AQ9UI33 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SCN11AQ9UI33 RBPJP2-201ENST00000618187 1444 ntBASIC6.28□□□□□ -1.4
SCN11AQ9UI33 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SCN11AQ9UI33 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC6.28□□□□□ -1.4
SCN11AQ9UI33 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms