Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 FAR2P1-206ENST00000449736 709 ntBASIC5.72□□□□□ -1.49
CCSER1Q9C0I3 AC092647.2-201ENST00000452998 253 ntBASIC5.72□□□□□ -1.49
CCSER1Q9C0I3 AC005532.2-201ENST00000467154 373 ntBASIC5.72□□□□□ -1.49
CCSER1Q9C0I3 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.72□□□□□ -1.49
CCSER1Q9C0I3 AC016687.1-201ENST00000482574 353 ntBASIC5.72□□□□□ -1.49
CCSER1Q9C0I3 SNRPCP2-201ENST00000504370 475 ntBASIC5.72□□□□□ -1.49
CCSER1Q9C0I3 RFPL4AP3-201ENST00000515267 345 ntBASIC5.72□□□□□ -1.49
CCSER1Q9C0I3 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.72□□□□□ -1.49
CCSER1Q9C0I3 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.72□□□□□ -1.49
CCSER1Q9C0I3 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.72□□□□□ -1.49
CCSER1Q9C0I3 AP002373.2-201ENST00000541631 1060 ntBASIC5.72□□□□□ -1.49
CCSER1Q9C0I3 AC013244.1-201ENST00000604279 193 ntBASIC5.72□□□□□ -1.49
CCSER1Q9C0I3 AL451049.1-201ENST00000608672 497 ntBASIC5.72□□□□□ -1.49
CCSER1Q9C0I3 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.72□□□□□ -1.49
CCSER1Q9C0I3 Z95327.3-201ENST00000610385 572 ntBASIC5.72□□□□□ -1.49
CCSER1Q9C0I3 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCSER1Q9C0I3 AP002505.2-201ENST00000623585 696 ntBASIC5.72□□□□□ -1.49
CCSER1Q9C0I3 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCSER1Q9C0I3 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.72□□□□□ -1.49
CCSER1Q9C0I3 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.72□□□□□ -1.49
CCSER1Q9C0I3 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CCSER1Q9C0I3 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCSER1Q9C0I3 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCSER1Q9C0I3 AC019072.1-201ENST00000604535 1551 ntBASIC5.72□□□□□ -1.49
CCSER1Q9C0I3 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.72□□□□□ -1.49
CCSER1Q9C0I3 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
CCSER1Q9C0I3 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.71□□□□□ -1.49
CCSER1Q9C0I3 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CCSER1Q9C0I3 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 AC013442.1-201ENST00000397347 228 ntBASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 RN7SKP278-201ENST00000410504 342 ntBASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 DPPA2P3-201ENST00000411853 655 ntBASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 AC234781.4-201ENST00000419384 244 ntBASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 AC104333.2-201ENST00000422630 192 ntBASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 EEF1B2P5-201ENST00000444820 548 ntBASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 AC091180.1-201ENST00000462104 372 ntBASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 AC097484.1-201ENST00000471148 389 ntBASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 AC073073.1-201ENST00000493920 463 ntBASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 AC027308.1-201ENST00000517993 110 ntBASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 AC022832.1-201ENST00000530718 645 ntBASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 HAUS8P1-201ENST00000549005 542 ntBASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 AC093591.2-201ENST00000565254 3843 ntBASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 AC011447.4-201ENST00000587562 111 ntBASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 AL139407.1-201ENST00000613826 1175 ntBASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 MIR6719-201ENST00000622428 87 ntBASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 CDC27P2-201ENST00000425026 1922 ntBASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 ZNF733P-202ENST00000444809 1573 ntBASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCSER1Q9C0I3 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CCSER1Q9C0I3 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCSER1Q9C0I3 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCSER1Q9C0I3 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCSER1Q9C0I3 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CCSER1Q9C0I3 AL353625.1-202ENST00000366273 571 ntBASIC5.7□□□□□ -1.5
CCSER1Q9C0I3 RN7SKP126-201ENST00000411143 300 ntBASIC5.7□□□□□ -1.5
CCSER1Q9C0I3 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.7□□□□□ -1.5
CCSER1Q9C0I3 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.7□□□□□ -1.5
CCSER1Q9C0I3 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.7□□□□□ -1.5
CCSER1Q9C0I3 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.7□□□□□ -1.5
CCSER1Q9C0I3 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.7□□□□□ -1.5
CCSER1Q9C0I3 AL450023.3-201ENST00000440592 271 ntBASIC5.7□□□□□ -1.5
CCSER1Q9C0I3 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCSER1Q9C0I3 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCSER1Q9C0I3 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.7□□□□□ -1.5
CCSER1Q9C0I3 AC105031.1-201ENST00000518550 476 ntBASIC5.7□□□□□ -1.5
CCSER1Q9C0I3 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.7□□□□□ -1.5
CCSER1Q9C0I3 AC116553.2-201ENST00000564203 463 ntBASIC5.7□□□□□ -1.5
CCSER1Q9C0I3 AC007342.5-201ENST00000571340 2142 ntBASIC5.7□□□□□ -1.5
CCSER1Q9C0I3 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.7□□□□□ -1.5
CCSER1Q9C0I3 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCSER1Q9C0I3 C4BPAP1-201ENST00000415474 1893 ntBASIC5.7□□□□□ -1.5
CCSER1Q9C0I3 AC109780.1-201ENST00000451768 1344 ntBASIC5.7□□□□□ -1.5
CCSER1Q9C0I3 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.7□□□□□ -1.5
CCSER1Q9C0I3 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCSER1Q9C0I3 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CCSER1Q9C0I3 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCSER1Q9C0I3 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.69□□□□□ -1.5
CCSER1Q9C0I3 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms