Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 OR8Q1P-201ENST00000526467 655 ntBASIC7.55□□□□□ -1.2
SCAPERQ9BY12 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC7.55□□□□□ -1.2
SCAPERQ9BY12 TVP23CP2-201ENST00000571473 623 ntBASIC7.55□□□□□ -1.2
SCAPERQ9BY12 AP005119.2-201ENST00000579735 1105 ntBASIC7.55□□□□□ -1.2
SCAPERQ9BY12 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SCAPERQ9BY12 IPO5-229ENST00000631030 192 ntTSL 5 BASIC7.55□□□□□ -1.2
SCAPERQ9BY12 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC7.55□□□□□ -1.2
SCAPERQ9BY12 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SCAPERQ9BY12 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SCAPERQ9BY12 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SCAPERQ9BY12 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SCAPERQ9BY12 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
SCAPERQ9BY12 AL137141.1-201ENST00000624622 4836 ntBASIC7.54□□□□□ -1.2
SCAPERQ9BY12 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
SCAPERQ9BY12 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
SCAPERQ9BY12 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SCAPERQ9BY12 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC7.54□□□□□ -1.2
SCAPERQ9BY12 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SCAPERQ9BY12 U3.30-201ENST00000391308 210 ntBASIC7.54□□□□□ -1.2
SCAPERQ9BY12 RN7SKP17-201ENST00000411242 351 ntBASIC7.54□□□□□ -1.2
SCAPERQ9BY12 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC7.54□□□□□ -1.2
SCAPERQ9BY12 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC7.54□□□□□ -1.2
SCAPERQ9BY12 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC7.54□□□□□ -1.2
SCAPERQ9BY12 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC7.54□□□□□ -1.2
SCAPERQ9BY12 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SCAPERQ9BY12 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC7.54□□□□□ -1.2
SCAPERQ9BY12 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC7.54□□□□□ -1.2
SCAPERQ9BY12 RNF138P2-201ENST00000603490 592 ntBASIC7.54□□□□□ -1.2
SCAPERQ9BY12 AC092653.1-201ENST00000608509 531 ntBASIC7.54□□□□□ -1.2
SCAPERQ9BY12 AC005618.4-201ENST00000625053 554 ntBASIC7.54□□□□□ -1.2
SCAPERQ9BY12 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
SCAPERQ9BY12 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SCAPERQ9BY12 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SCAPERQ9BY12 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SCAPERQ9BY12 AL592148.3-201ENST00000608771 2646 ntBASIC7.54□□□□□ -1.2
SCAPERQ9BY12 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SCAPERQ9BY12 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
SCAPERQ9BY12 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SCAPERQ9BY12 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC7.54□□□□□ -1.2
SCAPERQ9BY12 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SCAPERQ9BY12 AC020656.2-201ENST00000613291 5309 ntBASIC7.53□□□□□ -1.2
SCAPERQ9BY12 SNORD113.2-201ENST00000364166 89 ntBASIC7.53□□□□□ -1.2
SCAPERQ9BY12 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC7.53□□□□□ -1.2
SCAPERQ9BY12 FABP7P1-201ENST00000424004 391 ntBASIC7.53□□□□□ -1.2
SCAPERQ9BY12 IGKV1OR9-1-201ENST00000424370 284 ntBASIC7.53□□□□□ -1.2
SCAPERQ9BY12 AC017019.1-201ENST00000426129 261 ntBASIC7.53□□□□□ -1.2
SCAPERQ9BY12 RPS27AP6-201ENST00000427962 448 ntBASIC7.53□□□□□ -1.2
SCAPERQ9BY12 CYCSP11-201ENST00000436426 315 ntBASIC7.53□□□□□ -1.2
SCAPERQ9BY12 AC022133.1-201ENST00000490961 571 ntBASIC7.53□□□□□ -1.2
SCAPERQ9BY12 SLC25A15P5-201ENST00000508033 253 ntBASIC7.53□□□□□ -1.2
SCAPERQ9BY12 AC093815.1-201ENST00000508637 280 ntBASIC7.53□□□□□ -1.2
SCAPERQ9BY12 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC7.53□□□□□ -1.2
SCAPERQ9BY12 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC7.53□□□□□ -1.2
SCAPERQ9BY12 AC025857.2-201ENST00000602711 238 ntBASIC7.53□□□□□ -1.2
SCAPERQ9BY12 AC011944.2-201ENST00000624440 683 ntBASIC7.53□□□□□ -1.2
SCAPERQ9BY12 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC7.53□□□□□ -1.2
SCAPERQ9BY12 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SCAPERQ9BY12 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC7.53□□□□□ -1.2
SCAPERQ9BY12 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
SCAPERQ9BY12 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
SCAPERQ9BY12 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
SCAPERQ9BY12 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC7.53□□□□□ -1.2
SCAPERQ9BY12 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC7.53□□□□□ -1.2
SCAPERQ9BY12 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
SCAPERQ9BY12 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC7.53□□□□□ -1.2
SCAPERQ9BY12 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SCAPERQ9BY12 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SCAPERQ9BY12 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SCAPERQ9BY12 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SCAPERQ9BY12 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SCAPERQ9BY12 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
SCAPERQ9BY12 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SCAPERQ9BY12 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SCAPERQ9BY12 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
SCAPERQ9BY12 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
SCAPERQ9BY12 OFD1P8Y-201ENST00000449148 1433 ntBASIC7.53□□□□□ -1.2
SCAPERQ9BY12 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC7.53□□□□□ -1.2
SCAPERQ9BY12 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC7.52□□□□□ -1.2
SCAPERQ9BY12 HYALP1-201ENST00000417674 1279 ntBASIC7.52□□□□□ -1.2
SCAPERQ9BY12 AC006065.1-201ENST00000422539 802 ntBASIC7.52□□□□□ -1.2
SCAPERQ9BY12 MRPS21P2-201ENST00000424704 264 ntBASIC7.52□□□□□ -1.2
SCAPERQ9BY12 RPEP3-201ENST00000425462 676 ntBASIC7.52□□□□□ -1.2
SCAPERQ9BY12 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC7.52□□□□□ -1.2
SCAPERQ9BY12 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC7.52□□□□□ -1.2
SCAPERQ9BY12 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC7.52□□□□□ -1.2
SCAPERQ9BY12 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC7.52□□□□□ -1.2
SCAPERQ9BY12 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC7.52□□□□□ -1.2
SCAPERQ9BY12 DERA-209ENST00000532964 854 ntTSL 5 BASIC7.52□□□□□ -1.2
SCAPERQ9BY12 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC7.52□□□□□ -1.2
SCAPERQ9BY12 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC7.52□□□□□ -1.2
SCAPERQ9BY12 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.2
SCAPERQ9BY12 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
SCAPERQ9BY12 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC7.52□□□□□ -1.2
SCAPERQ9BY12 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
SCAPERQ9BY12 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SCAPERQ9BY12 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
SCAPERQ9BY12 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
SCAPERQ9BY12 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.21
SCAPERQ9BY12 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
SCAPERQ9BY12 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms