Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
RPAP1Q9BWH6 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
RPAP1Q9BWH6 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RPAP1Q9BWH6 THAP12P5-201ENST00000405864 2275 ntBASIC6.21□□□□□ -1.42
RPAP1Q9BWH6 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RPAP1Q9BWH6 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RPAP1Q9BWH6 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RPAP1Q9BWH6 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
RPAP1Q9BWH6 AL360270.2-201ENST00000562952 5985 ntBASIC6.21□□□□□ -1.42
RPAP1Q9BWH6 AC007996.1-201ENST00000620414 2821 ntBASIC6.21□□□□□ -1.42
RPAP1Q9BWH6 MTND5P12-201ENST00000502851 1449 ntBASIC6.21□□□□□ -1.42
RPAP1Q9BWH6 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RPAP1Q9BWH6 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RPAP1Q9BWH6 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
RPAP1Q9BWH6 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.2□□□□□ -1.42
RPAP1Q9BWH6 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
RPAP1Q9BWH6 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.2□□□□□ -1.42
RPAP1Q9BWH6 MIR600-201ENST00000385007 98 ntBASIC6.2□□□□□ -1.42
RPAP1Q9BWH6 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RPAP1Q9BWH6 RPL26P29-201ENST00000415623 438 ntBASIC6.2□□□□□ -1.42
RPAP1Q9BWH6 AL590139.1-201ENST00000416267 400 ntBASIC6.2□□□□□ -1.42
RPAP1Q9BWH6 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6.2□□□□□ -1.42
RPAP1Q9BWH6 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.2□□□□□ -1.42
RPAP1Q9BWH6 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.2□□□□□ -1.42
RPAP1Q9BWH6 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC6.2□□□□□ -1.42
RPAP1Q9BWH6 BX842559.2-201ENST00000451418 605 ntBASIC6.2□□□□□ -1.42
RPAP1Q9BWH6 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.2□□□□□ -1.42
RPAP1Q9BWH6 RPL7P16-201ENST00000479738 738 ntBASIC6.2□□□□□ -1.42
RPAP1Q9BWH6 FGB-207ENST00000509493 1164 ntTSL 5 BASIC6.2□□□□□ -1.42
RPAP1Q9BWH6 CASC19-203ENST00000523510 575 ntTSL 3 BASIC6.2□□□□□ -1.42
RPAP1Q9BWH6 AC005000.1-201ENST00000536192 288 ntBASIC6.2□□□□□ -1.42
RPAP1Q9BWH6 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
RPAP1Q9BWH6 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC6.2□□□□□ -1.42
RPAP1Q9BWH6 AC009117.1-201ENST00000563948 554 ntBASIC6.2□□□□□ -1.42
RPAP1Q9BWH6 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RPAP1Q9BWH6 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RPAP1Q9BWH6 AC127024.5-201ENST00000580085 462 ntBASIC6.2□□□□□ -1.42
RPAP1Q9BWH6 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.2□□□□□ -1.42
RPAP1Q9BWH6 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.2□□□□□ -1.42
RPAP1Q9BWH6 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.2□□□□□ -1.42
RPAP1Q9BWH6 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RPAP1Q9BWH6 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RPAP1Q9BWH6 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RPAP1Q9BWH6 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
RPAP1Q9BWH6 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.2□□□□□ -1.42
RPAP1Q9BWH6 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
RPAP1Q9BWH6 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RPAP1Q9BWH6 MFSD8-216ENST00000641147 4009 ntBASIC6.2□□□□□ -1.42
RPAP1Q9BWH6 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
RPAP1Q9BWH6 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.2□□□□□ -1.42
RPAP1Q9BWH6 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RPAP1Q9BWH6 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RPAP1Q9BWH6 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
RPAP1Q9BWH6 MIR141-201ENST00000384975 95 ntBASIC6.19□□□□□ -1.42
RPAP1Q9BWH6 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
RPAP1Q9BWH6 RAB28P1-201ENST00000411517 641 ntBASIC6.19□□□□□ -1.42
RPAP1Q9BWH6 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.19□□□□□ -1.42
RPAP1Q9BWH6 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC6.19□□□□□ -1.42
RPAP1Q9BWH6 AC009238.2-201ENST00000431026 355 ntBASIC6.19□□□□□ -1.42
RPAP1Q9BWH6 RPL12P18-201ENST00000437175 325 ntBASIC6.19□□□□□ -1.42
RPAP1Q9BWH6 AC005412.2-201ENST00000492004 341 ntBASIC6.19□□□□□ -1.42
RPAP1Q9BWH6 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.19□□□□□ -1.42
RPAP1Q9BWH6 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.19□□□□□ -1.42
RPAP1Q9BWH6 TBCA-207ENST00000520039 157 ntTSL 3 BASIC6.19□□□□□ -1.42
RPAP1Q9BWH6 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RPAP1Q9BWH6 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC6.19□□□□□ -1.42
RPAP1Q9BWH6 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.19□□□□□ -1.42
RPAP1Q9BWH6 AC012557.1-201ENST00000607115 611 ntBASIC6.19□□□□□ -1.42
RPAP1Q9BWH6 uc_338.18-201ENST00000615451 175 ntBASIC6.19□□□□□ -1.42
RPAP1Q9BWH6 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.19□□□□□ -1.42
RPAP1Q9BWH6 AC138965.3-201ENST00000623875 498 ntBASIC6.19□□□□□ -1.42
RPAP1Q9BWH6 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RPAP1Q9BWH6 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RPAP1Q9BWH6 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.19□□□□□ -1.42
RPAP1Q9BWH6 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RPAP1Q9BWH6 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
RPAP1Q9BWH6 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.19□□□□□ -1.42
RPAP1Q9BWH6 XKRY2-202ENST00000623874 1581 ntBASIC6.19□□□□□ -1.42
RPAP1Q9BWH6 XKRY-202ENST00000624960 1581 ntBASIC6.19□□□□□ -1.42
RPAP1Q9BWH6 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RPAP1Q9BWH6 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC6.19□□□□□ -1.42
RPAP1Q9BWH6 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC6.19□□□□□ -1.42
RPAP1Q9BWH6 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.19□□□□□ -1.42
RPAP1Q9BWH6 HSPA8P14-201ENST00000552265 1805 ntBASIC6.19□□□□□ -1.42
RPAP1Q9BWH6 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
RPAP1Q9BWH6 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 U3.32-201ENST00000408116 212 ntBASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 CEACAMP9-201ENST00000442990 513 ntBASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 AC021006.3-201ENST00000530771 192 ntBASIC6.18□□□□□ -1.42
RPAP1Q9BWH6 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms