Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 SEPT7P6-201ENST00000469999 1143 ntBASIC4.23□□□□□ -1.73
HDHD3Q9BSH5 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.23□□□□□ -1.73
HDHD3Q9BSH5 RN7SL184P-201ENST00000488308 297 ntBASIC4.23□□□□□ -1.73
HDHD3Q9BSH5 RN7SL441P-201ENST00000492388 296 ntBASIC4.23□□□□□ -1.73
HDHD3Q9BSH5 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.23□□□□□ -1.73
HDHD3Q9BSH5 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.23□□□□□ -1.73
HDHD3Q9BSH5 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.23□□□□□ -1.73
HDHD3Q9BSH5 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.23□□□□□ -1.73
HDHD3Q9BSH5 AC027026.1-201ENST00000532323 742 ntBASIC4.23□□□□□ -1.73
HDHD3Q9BSH5 AL049830.4-201ENST00000555149 351 ntBASIC4.23□□□□□ -1.73
HDHD3Q9BSH5 CYCSP40-201ENST00000575927 294 ntBASIC4.23□□□□□ -1.73
HDHD3Q9BSH5 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.23□□□□□ -1.73
HDHD3Q9BSH5 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.23□□□□□ -1.73
HDHD3Q9BSH5 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.23□□□□□ -1.73
HDHD3Q9BSH5 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.23□□□□□ -1.73
HDHD3Q9BSH5 AC007204.2-201ENST00000615022 616 ntBASIC4.23□□□□□ -1.73
HDHD3Q9BSH5 AC002044.3-201ENST00000623314 541 ntBASIC4.23□□□□□ -1.73
HDHD3Q9BSH5 SAMMSON-209ENST00000641222 1100 ntBASIC4.23□□□□□ -1.73
HDHD3Q9BSH5 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.23□□□□□ -1.73
HDHD3Q9BSH5 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HDHD3Q9BSH5 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
HDHD3Q9BSH5 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
HDHD3Q9BSH5 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.23□□□□□ -1.73
HDHD3Q9BSH5 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HDHD3Q9BSH5 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HDHD3Q9BSH5 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HDHD3Q9BSH5 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 PANDAR-201ENST00000629595 1506 ntBASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 RN7SKP113-201ENST00000363891 295 ntBASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 AL353625.1-202ENST00000366273 571 ntBASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 SNORA67-201ENST00000384423 137 ntBASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 SNORA70.10-201ENST00000384515 134 ntBASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 AC009804.1-201ENST00000400949 179 ntBASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 SNORA77-201ENST00000408716 125 ntBASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 MTND4LP21-201ENST00000415303 295 ntBASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 RNA5SP103-201ENST00000459503 118 ntBASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 GYG1P1-201ENST00000460864 698 ntBASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 ENPP7P9-201ENST00000514456 627 ntBASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 AC012339.2-201ENST00000523996 453 ntBASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 AL512310.9-201ENST00000553311 948 ntBASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 AC011270.1-201ENST00000558606 583 ntBASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 AC138473.1-201ENST00000605717 526 ntBASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 AC096586.2-201ENST00000610260 441 ntBASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 AP001962.1-201ENST00000624114 559 ntBASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 MIR1910-201ENST00000636955 80 ntBASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 PCAT14-202ENST00000627127 3935 ntBASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 AC007342.9-201ENST00000623877 1385 ntBASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 LINC01355-201ENST00000566551 5444 ntBASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 CUL4AP1-201ENST00000514750 1863 ntBASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HDHD3Q9BSH5 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.21□□□□□ -1.73
HDHD3Q9BSH5 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
HDHD3Q9BSH5 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
HDHD3Q9BSH5 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.21□□□□□ -1.73
HDHD3Q9BSH5 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.21□□□□□ -1.73
HDHD3Q9BSH5 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HDHD3Q9BSH5 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.21□□□□□ -1.74
HDHD3Q9BSH5 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HDHD3Q9BSH5 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
HDHD3Q9BSH5 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
HDHD3Q9BSH5 AL031985.1-201ENST00000392713 418 ntBASIC4.21□□□□□ -1.74
HDHD3Q9BSH5 AC240504.1-201ENST00000395709 845 ntBASIC4.21□□□□□ -1.74
HDHD3Q9BSH5 NUDT19P3-201ENST00000404698 555 ntBASIC4.21□□□□□ -1.74
HDHD3Q9BSH5 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
HDHD3Q9BSH5 AC093655.2-201ENST00000425735 631 ntBASIC4.21□□□□□ -1.74
HDHD3Q9BSH5 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.21□□□□□ -1.74
HDHD3Q9BSH5 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
HDHD3Q9BSH5 AL389925.1-201ENST00000432257 728 ntBASIC4.21□□□□□ -1.74
HDHD3Q9BSH5 RPL34P6-201ENST00000432390 345 ntBASIC4.21□□□□□ -1.74
HDHD3Q9BSH5 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.21□□□□□ -1.74
HDHD3Q9BSH5 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
HDHD3Q9BSH5 HMGB1P4-201ENST00000455362 567 ntBASIC4.21□□□□□ -1.74
HDHD3Q9BSH5 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.21□□□□□ -1.74
HDHD3Q9BSH5 RPS17P2-201ENST00000461663 408 ntBASIC4.21□□□□□ -1.74
HDHD3Q9BSH5 RN7SL799P-201ENST00000475891 298 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms