Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.64□□□□□ -1.51
HMGB4Q8WW32 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.64□□□□□ -1.51
HMGB4Q8WW32 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
HMGB4Q8WW32 MFSD8-239ENST00000641590 2479 ntBASIC5.64□□□□□ -1.51
HMGB4Q8WW32 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
HMGB4Q8WW32 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMGB4Q8WW32 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMGB4Q8WW32 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC5.64□□□□□ -1.51
HMGB4Q8WW32 RNU6-1005P-201ENST00000384519 107 ntBASIC5.64□□□□□ -1.51
HMGB4Q8WW32 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HMGB4Q8WW32 HMGB3P19-201ENST00000403971 560 ntBASIC5.64□□□□□ -1.51
HMGB4Q8WW32 RN7SKP213-201ENST00000410746 298 ntBASIC5.64□□□□□ -1.51
HMGB4Q8WW32 AL390774.1-201ENST00000411924 246 ntBASIC5.64□□□□□ -1.51
HMGB4Q8WW32 METTL15P3-201ENST00000415522 1221 ntBASIC5.64□□□□□ -1.51
HMGB4Q8WW32 RPL12P3-201ENST00000440080 396 ntBASIC5.64□□□□□ -1.51
HMGB4Q8WW32 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.64□□□□□ -1.51
HMGB4Q8WW32 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMGB4Q8WW32 RBMY2TP-201ENST00000451162 947 ntBASIC5.64□□□□□ -1.51
HMGB4Q8WW32 MEMO1P4-201ENST00000453590 386 ntBASIC5.64□□□□□ -1.51
HMGB4Q8WW32 AL645937.3-201ENST00000453647 936 ntBASIC5.64□□□□□ -1.51
HMGB4Q8WW32 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.64□□□□□ -1.51
HMGB4Q8WW32 RN7SL222P-201ENST00000476452 299 ntBASIC5.64□□□□□ -1.51
HMGB4Q8WW32 RPS18P6-201ENST00000476880 458 ntBASIC5.64□□□□□ -1.51
HMGB4Q8WW32 RPL21P47-201ENST00000483696 477 ntBASIC5.64□□□□□ -1.51
HMGB4Q8WW32 AC107398.1-201ENST00000486904 505 ntBASIC5.64□□□□□ -1.51
HMGB4Q8WW32 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.64□□□□□ -1.51
HMGB4Q8WW32 AC025459.1-201ENST00000504072 156 ntBASIC5.64□□□□□ -1.51
HMGB4Q8WW32 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.64□□□□□ -1.51
HMGB4Q8WW32 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.64□□□□□ -1.51
HMGB4Q8WW32 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.64□□□□□ -1.51
HMGB4Q8WW32 OR8X1P-201ENST00000534542 869 ntBASIC5.64□□□□□ -1.51
HMGB4Q8WW32 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.64□□□□□ -1.51
HMGB4Q8WW32 AC126615.2-201ENST00000553003 515 ntBASIC5.64□□□□□ -1.51
HMGB4Q8WW32 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.64□□□□□ -1.51
HMGB4Q8WW32 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.64□□□□□ -1.51
HMGB4Q8WW32 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.64□□□□□ -1.51
HMGB4Q8WW32 AC091057.3-201ENST00000602684 733 ntBASIC5.64□□□□□ -1.51
HMGB4Q8WW32 AC012557.1-201ENST00000607115 611 ntBASIC5.64□□□□□ -1.51
HMGB4Q8WW32 AL050303.3-201ENST00000613704 284 ntBASIC5.64□□□□□ -1.51
HMGB4Q8WW32 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMGB4Q8WW32 AP002505.2-201ENST00000623585 696 ntBASIC5.64□□□□□ -1.51
HMGB4Q8WW32 AC073342.3-201ENST00000624211 193 ntBASIC5.64□□□□□ -1.51
HMGB4Q8WW32 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.64□□□□□ -1.51
HMGB4Q8WW32 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.64□□□□□ -1.51
HMGB4Q8WW32 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMGB4Q8WW32 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMGB4Q8WW32 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.64□□□□□ -1.51
HMGB4Q8WW32 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMGB4Q8WW32 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
HMGB4Q8WW32 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMGB4Q8WW32 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMGB4Q8WW32 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMGB4Q8WW32 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMGB4Q8WW32 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMGB4Q8WW32 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 RPL23P2-201ENST00000320371 421 ntBASIC5.63□□□□□ -1.51
HMGB4Q8WW32 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 AC005294.1-201ENST00000355509 281 ntBASIC5.63□□□□□ -1.51
HMGB4Q8WW32 RNA5SP183-201ENST00000362452 119 ntBASIC5.63□□□□□ -1.51
HMGB4Q8WW32 RN7SKP6-201ENST00000364795 319 ntBASIC5.63□□□□□ -1.51
HMGB4Q8WW32 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 SNORA70.9-201ENST00000384370 135 ntBASIC5.63□□□□□ -1.51
HMGB4Q8WW32 MIR551A-201ENST00000385042 96 ntBASIC5.63□□□□□ -1.51
HMGB4Q8WW32 AL355615.1-201ENST00000406187 641 ntBASIC5.63□□□□□ -1.51
HMGB4Q8WW32 AL445183.3-201ENST00000414168 502 ntBASIC5.63□□□□□ -1.51
HMGB4Q8WW32 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 PNRC2P1-201ENST00000423940 420 ntBASIC5.63□□□□□ -1.51
HMGB4Q8WW32 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 HSPE1P16-201ENST00000426640 348 ntBASIC5.63□□□□□ -1.51
HMGB4Q8WW32 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 HMGB3P10-201ENST00000434734 572 ntBASIC5.63□□□□□ -1.51
HMGB4Q8WW32 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 LDHAP2-201ENST00000437325 985 ntBASIC5.63□□□□□ -1.51
HMGB4Q8WW32 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 RPL6P5-201ENST00000445678 828 ntBASIC5.63□□□□□ -1.51
HMGB4Q8WW32 AC044797.1-201ENST00000445744 679 ntBASIC5.63□□□□□ -1.51
HMGB4Q8WW32 HMGB1P26-201ENST00000452520 628 ntBASIC5.63□□□□□ -1.51
HMGB4Q8WW32 OSTCP1-201ENST00000455507 450 ntBASIC5.63□□□□□ -1.51
HMGB4Q8WW32 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 AL035690.1-201ENST00000490892 383 ntBASIC5.63□□□□□ -1.51
HMGB4Q8WW32 AC231760.1-201ENST00000498002 260 ntBASIC5.63□□□□□ -1.51
HMGB4Q8WW32 CDH12P2-201ENST00000504393 298 ntBASIC5.63□□□□□ -1.51
HMGB4Q8WW32 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms