Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 NOP56P2-201ENST00000447491 769 ntBASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 GYG1P1-201ENST00000460864 698 ntBASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 AC091180.1-201ENST00000462104 372 ntBASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 AL591473.1-201ENST00000464297 313 ntBASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 AC105918.1-201ENST00000474399 838 ntBASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 RPL7P40-201ENST00000481703 745 ntBASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 AC025458.1-201ENST00000506046 166 ntBASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 AC006427.1-201ENST00000514359 712 ntBASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 HSD3BP3-201ENST00000514706 994 ntBASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 AC116917.1-201ENST00000520558 305 ntBASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 AL845552.1-201ENST00000556820 323 ntBASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 AC092121.1-201ENST00000569452 202 ntBASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 AC107308.1-201ENST00000615897 301 ntBASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 AC005899.6-201ENST00000620729 297 ntBASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 AC015908.5-201ENST00000623289 343 ntBASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 AC114786.1-201ENST00000512892 1415 ntBASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 AL022393.1-201ENST00000625142 1677 ntBASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 AL672167.1-204ENST00000641875 3017 ntBASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 OR14L1P-202ENST00000641545 3009 ntBASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 HMGB1P20-201ENST00000402555 677 ntBASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 EIF4A1P3-201ENST00000411521 244 ntBASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 AC009238.2-201ENST00000431026 355 ntBASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 RPL34P6-201ENST00000432390 345 ntBASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 MAPRE1P3-201ENST00000435438 796 ntBASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 AMYP1-201ENST00000440059 1023 ntBASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 AL357520.1-201ENST00000441557 453 ntBASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 RPS11P7-201ENST00000442125 465 ntBASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 AC022431.1-201ENST00000450941 438 ntBASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 LRRC37A14P-201ENST00000452297 462 ntBASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 AC093166.2-201ENST00000455969 1017 ntBASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 AL133244.1-201ENST00000456007 258 ntBASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 LDHBP2-201ENST00000456969 1005 ntBASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 AC090638.1-201ENST00000498296 909 ntBASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 AC122718.2-201ENST00000505325 591 ntBASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 AC073358.1-201ENST00000505671 684 ntBASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 MRPS5P3-201ENST00000515577 166 ntBASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 RNA5SP303-201ENST00000516192 130 ntBASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 SNORA48.9-201ENST00000516419 162 ntBASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 AP004607.2-201ENST00000533949 322 ntBASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 AL162431.4-201ENST00000604674 411 ntBASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 AL135786.2-201ENST00000608422 615 ntBASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 AL118522.2-201ENST00000616045 615 ntBASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 AC129915.3-201ENST00000634128 948 ntBASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CCDC71LQ8N9Z2 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCDC71LQ8N9Z2 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.72
CCDC71LQ8N9Z2 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CCDC71LQ8N9Z2 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC71LQ8N9Z2 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms